Skip to main content
. 2018 Dec 27;30(4):650–673. doi: 10.1089/ars.2017.7374

Table 4.

Steady-State Kinetic Parameters for the Proline Dehydrogenase and l-Glutamate γ-Semialdehyde Dehydrogenase Activities of Proline Utilization A

  PRODH (variable substrate is Pro) GSALDH (variable substrate is P5C)
PutA kcat (s−1) Km (mM) kcat/Km (M−1·s−1) kcat (s−1) KmM) kcat/Km (M−1·s−1)
BjPutAa 2 31 65 2.2 200 11,000
BjPutAb 5.6 150 37      
BjPutAc 3.1 43 72 3.4 420 8100
RcPutAd 20.7 54.3 383 7.3 1530 4800
RcPutAe 1.0 5.6 179      
EcPutAf 5.2 42 124 5.16 2000 2600
EcPutAg 12 100 120      
EcPutAg 6.7 230 29      
EcPutAh 0.43 1.5 287      
GsPutAi 0.67 89 7 7.5 35 214,000
HpPutAj 8 146 56      
CfPutAk 2.6 145 18 1.7 54 32,000
a

Proline parameters were determined at 23°C with CoQ1 fixed at 100 μM (121). The P5C parameters were determined at saturating NAD+ concentration.

b

DCPIP assay (52).

c

CoQ1 fixed at 250 μM as the electron acceptor in the PRODH assays (4).

d

Proline parameters were determined with [DCPIP] fixed at 75 μM (70). The P5C parameters were determined with [NAD+] fixed at 200 μM.

e

CoQ1 as the electron acceptor (3).

f

Proline parameters were determined by fitting to a two-site ping-pong mechanism with CoQ1 as the electron acceptor (85). The P5C parameters were obtained by fitting to an ordered ternary mechanism (84). kcat for the coupled PRODH-GSALDH reaction from Moxley et al. (84).

g

DCPIP assay (156, 157).

h

Parameters for proline were estimated from the oAB assay with membrane vesicles providing the electron acceptor for the FAD (85).

i

Proline parameters were determined with menadione fixed at 100 μM (117). The P5C parameters were determined with [NAD+] fixed at 200 μM.

j

DCPIP assay (53).

k

PRODH parameters were determined from the DCPIP assay (50).

oAB, o-aminobenzaldehyde; DCPIP, 2,6-dichlorophenolindophenol; FAD, flavin adenine dinucleotide; HpPutA, Helicobacter pylori proline utilization A; PRODH, proline dehydrogenase; RcPutA, Rhodobacter capsulatus proline utilization A.