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. 2019 Jan 19;11:2. doi: 10.1186/s13073-019-0614-1

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 7 — Time and memory usage of CIRI-full on human brain RNA-seq data sets. The CIRI-full pipeline consists two components, one is BSJ detection using CIRI2/CIRI-AS, the other is RO detection, and both are executed simultaneously. Height of boxes represents the running time of each module in this pipeline. Options “-t 5” was used for the last four datasets to activate the multithreading function of CIRI2 and BWA