Table 1. Meiosis genes inventoried in the transcriptomes of 18 strains of 15 species of chrysophytes.
Gene | Chrysophyte species | |||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Acrispumella msimbaziensis | Apoikiospumella mondseeiensis | Cornospumella fuschlensis | Dinobryon sp. (strain FU22KAK) | Dinobryon sp. (strain LO226KS) | Epipyxis sp. | Ochromonas or Spumella sp. | Pedospumella encystans | Pedospumella sinomuralis | Poteriochromonas malhemensis | Poteriospumella lacustris (strain JB07) | Poteriospumella lacustris (strain JBM10) | Poteriospumella lacustris (strain JBNZ41) | Spumella bureschii | Spumella lacusvadosi | Spumella vulgaris | Synura sp. | Uroglena sp. | |
Double-strand break formation | ||||||||||||||||||
REC114 | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
SPO11 | − | − | + | − | − | + | − | + | + | − | − | − | − | + | − | + | + | − |
Crossover regulation | ||||||||||||||||||
DMC1 | + | + | + | + | − | + | + | + | + | + | + | + | + | + | + | + | − | − |
HOP1 | − | − | − | − | − | + | − | − | + | − | − | + | + | − | − | + | − | + |
HOP2 | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
MER3 | − | + | + | + | − | + | + | + | + | + | + | + | + | + | + | + | + | + |
MND1 | − | − | + | + | − | + | − | + | − | + | + | + | + | + | + | − | + | + |
MSH4 | − | + | + | + | − | + | − | + | + | + | + | + | + | + | + | + | + | − |
MSH5 | − | − | + | + | − | + | − | + | + | + | + | + | + | + | + | + | + | − |
Double-strand break repair | ||||||||||||||||||
REC8 | − | − | + | + | − | + | − | + | + | + | + | + | + | + | + | + | − | − |
Bouquet formation | ||||||||||||||||||
SAD1 | − | − | + | + | − | + | − | + | + | + | + | + | + | + | + | + | − | + |
DNA damage sensing/response | ||||||||||||||||||
MRE11 | − | − | + | + | − | + | − | + | + | + | + | + | − | + | − | + | − | − |
RAD17 | + | + | + | + | − | + | + | + | + | + | + | + | + | + | + | − | + | − |
RAD23 | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
RAD24 | + | − | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
RAD50 | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
NBS1 | − | − | + | + | − | − | − | − | + | + | + | + | + | + | + | − | − | + |
Double-strand break repair (nonhomology end join) | ||||||||||||||||||
KU | − | − | + | + | − | + | − | + | + | + | + | + | + | + | − | + | + | − |
LIG4 | + | − | + | + | − | + | − | + | + | + | + | + | + | + | + | + | − | + |
LIF1 | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
Recombinational repair | ||||||||||||||||||
DNA2 | − | + | + | + | − | + | − | + | + | + | + | + | + | + | + | + | + | + |
MMS4 | − | − | − | − | − | + | − | + | − | − | − | − | − | + | − | + | + | − |
EME1 | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − | − |
EXO1 | − | − | + | + | − | + | − | + | + | + | + | + | + | + | − | + | + | + |
FEN1 | + | − | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
MLH1 | + | − | + | + | − | − | + | + | + | + | + | − | + | + | + | + | + | − |
MLH3 | − | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | − |
MPH1 | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
MSH2 | − | − | + | + | − | + | − | + | + | + | + | + | + | + | + | + | + | − |
MSH6 | + | − | + | + | − | + | − | + | + | + | + | + | + | + | + | + | + | + |
MUS81 | − | − | + | + | − | + | + | + | + | + | + | + | + | + | + | + | − | − |
PMS1 | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
RAD51 | + | + | + | + | − | + | + | + | + | + | + | + | + | + | + | + | − | − |
RAD52 | − | − | − | − | + | − | − | − | − | − | + | + | − | + | − | − | − | − |
RAD54 | − | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
RTEL | − | − | + | + | − | + | − | + | + | + | + | + | + | + | − | + | − | − |
SAE2 | + | − | + | + | − | + | + | + | + | + | + | + | + | + | + | + | + | + |
SLX1 | − | − | + | + | − | + | − | + | + | − | + | + | + | + | − | − | + | − |
SLX4 | + | − | + | − | + | + | + | + | + | − | − | − | − | + | + | + | − | − |
SMC5 | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
SMC6 | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + | + |
GEN1 | − | − | + | + | − | + | − | + | + | + | + | + | + | + | − | + | + | − |