Table 1.

The top 10 up-regulated and down-regulated circRNAs ranked by fold changes after SCI.

CircRNA	FC	P-value	FDR	Chrom	Strand	CircRNA type	Best transcript	GeneSymbol	Regulation
circRNA_005554	17.4927581	0.00249	0.07049	chr15	-	Exonic	NM_031783	Nefl	Down
circRNA_011688	11.0787102	0.00326	0.07374	chr4	+	Exonic	NM_001047116	Rundc3b	Down
circRNA_001668	10.3034657	0.00027	0.05619	chr1	-	Exonic	NM_012506	Atp1a3	Down
circRNA_015152	9.6814247	0.01177	0.09248	chr7	+	Exonic	NM_001271371	Anks1b	Down
circRNA_003787	9.6707443	0.01306	0.09515	chr12	+	Sense overlapping	NM_001105937	Sgsm1	Down
circRNA_005536	9.6595211	0.00082	0.06066	chr15	-	Exonic	XM_003751491	LOC691889	Down
circRNA_013612	9.5445837	0.00081	0.06066	chr6	-	Sense overlapping	NM_078620	Slc8a3	Down
circRNA_013610	9.4741174	0.00040	0.05971	chr6	-	Exonic	NM_078620	Slc8a3	Down
circRNA_015151	9.4653558	0.01049	0.09061	chr7	+	Sense overlapping	NM_001271371	Anks1b	Down
circRNA_009608	9.316022	0.00098	0.06066	chr20	-	Sense overlapping	NM_013189	Gnaz	Down
circRNA_014299	10.2046519	0.04402	0.15222	chr6	+	Exonic	NM_053888	Myt1l	Up
circRNA_014620	9.9983039	0.04890	0.16031	chr6	-	Exonic	NM_020083	Ralgapa1	Up
circRNA_31436	9.258806	0.03142	0.13033	chr18	+	Sense overlapping	NM_012499	Apc	Up
circRNA_002187	9.0443039	0.03409	0.13447	chr10	-	Exonic	XM_002727722	Dnah9	Up
circRNA_017723	9.0003643	0.02898	0.12586	chrX	-	Exonic	XM_229124	Smarca1	Up
circRNA_008695	8.8206292	0.02831	0.12445	chr2	+	Exonic	NM_001013200	Anp32e	Up
circRNA_002186	8.4481357	0.03361	0.13388	chr10	-	Exonic	XM_002727722	Dnah9	Up
circRNA_23780	7.577899	0.00934	0.08796	chr10	+	Exonic	NM_001013117	Phf12	Up
circRNA_014301	7.0536658	0.02369	0.11557	chr6	+	Exonic	NM_053888	Myt1l	Up
circRNA_005470	6.6801172	0.00001	0.02228	chr15	+	Sense overlapping	NM_031056	Mmp14	Up