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. 2018 Mar 19;10(2):120–130. doi: 10.1007/s13238-018-0526-7

Figure 3.

Figure 3

AFs bound to ITS2 and domain I. (A) Structure of Rpf1-TAP pre-60S near the ITS2. AFs, ITS2, 5.8S and individual domains of 25S rRNAs are color coded. All RPLs are shown in gray. (B) Structure of the Nog1-TAP pre-60S (PDB code: 3JCT) shown in the same view as (A). The dashed circle indicates the binding site of Brx1 and Ebp2 that would clash with H68 and H88. (C) Structure of Has1 bound to H16. (D) Superimposed structures of Mss116 in complex with ssRNA and dsRNA. Mss116 is aligned to Has1 in (C) by the RecA1 domain. The ternary complex structure (PDB code: 3I5X) is composed of Mss116 (green), ssRNA (yellow) and ATP analog (red). The binary complex containing the RecA2 domain of Mss116 bound to an RNA duplex (PDB code: 4DB2) is colored cyan and aligned to the ternary complex