Table 4.
Nucleotide content and gene count levels of the genome
| Attribute | Genome (total) | |
|---|---|---|
| Value | % of totala | |
| Size (bp) | 3,104,261 | 100 |
| G+C content (%) | 1,882,912 | 60.66 |
| Coding region (bp) | 2,769,278 | 89.21 |
| Total genes | 3,074 | 100 |
| RNA genes | 62 | 2.02 |
| Protein‐coding genes | 3,012 | 100 |
| Number of proteins associated with function prediction (nr+cogs not [S]) | 1,933 | 64.18 |
| Number of proteins associated with hypothetical protein | 763 | 25.33 |
| Genes with function prediction | 413 | 13.71 |
| Genes assigned to COGs | 134 | 4.45 |
| Genes with peptide signals | 375 | 12.45 |
| Gene associated with resistance genes | 1 | 0.03 |
| Gene associated with bacteriocin genes | 22 | 0.73 |
| Proteins associated with ORFans | 182 | 6.04 |
| Genes associated with PKS or NRPS | 9 | 0.29 |
a
The total is based on either the size of the genome in base pairs or the total number of protein‐coding genes in the annotated genome.