Table 1.
Pancreatic islet datasets
| Name | Journal | Year | Accesession # | Tissue type | Data type | Protocol | # Samples | # Cells | # Genes | # Cell types |
|---|---|---|---|---|---|---|---|---|---|---|
| Segerstolpe et al.8 | Cell Metabolism | 2016 | E-MTAB-5061 | Pancreatic islet | Single-cell RNA-seq | Smart-seq2 | 10 (6 H + 4 T2D) | 2209 | 25,453 | 14 + 1 NA |
| Segerstolpe et al.8 | Cell Metabolism | 2016 | E-MTAB-5060 | Pancreatic islet | Bulk RNA-seq | Smart-seq2 | 7 (3 H + 4 T2D) | NA | 25,453 | NA |
| Xin et al.9 | Cell Metabolism | 2016 | GSE81608 | Islet: endocrine | Single-cell RNA-seq | Illumina HiSeq 2500 | 18 (12 H + 6 T2D) | 1492 | 39,849 | 4 |
| Baron et al.4 | Cell Systems | 2016 | GSE81433 | Pancreatic islet | Single-cell RNA-seq | Illumina HiSeq 2500 (InDrop) | 3 healthy | 7729 | 17,434 | 14 + 1 NA |
| Fadista et al.6 | PNAS | 2014 | GSE50244 | Pancreatic islet | Bulk RNA-seq | Illumina HiSeq 2000 | 89 | NA | 56,638 | NA |