Table 6. Effect of 11 SNPs on eggshell color intensity trait in N146 population.
| SNP ID | Genotype | QB | QP | QT |
|---|---|---|---|---|
| rs315477097 | GG (77) | 34.71±1.19 | 3.86±0.10 | 38.57±1.24 |
| GC (61) | 33.46±1.33 | 3.85±0.12 | 37.31±1.39 | |
| CC (8) | 38.06±3.68 | 3.94±0.32 | 42.01±3.85 | |
| P value | 0.4628 | 0.9641 | 0.4810 | |
| rs315586328 | AA (118) | 34.76±0.96 | 3.81±0.08 | 38.56±1.00 |
| AT (27) | 32.63±2.01 | 4.10±0.18 | 36.74±2.10 | |
| TT (1) | 36.09±10.4 | 3.41±0.91 | 39.50±10.1 | |
| P value | 0.6272 | 0.2733 | 0.7310 | |
| rs316706283 | CC (77) | 34.83±1.18 | 3.87±0.10 | 38.70±1.23 |
| CG (60) | 33.05±1.34 | 3.82±0.11 | 36.86±1.40 | |
| GG (8) | 40.30±3.67 | 4.09±0.32 | 44.38±3.83 | |
| P value | 0.1577 | 0.7251 | 0.1619 | |
| rs313867043 | GG (82) | 35.02±1.14ab | 3.88±0.10 | 38.90±1.19ab |
| GA (54) | 32.54±1.41a | 3.74±0.12 | 36.28±1.47a | |
| AA (6) | 42.51±2.23b | 4.25±0.37 | 46.76±2.41b | |
| P value | 0.0407 | 0.3439 | 0.0383 | |
| rs316919101 | AA (37) | 34.55±1.70 | 3.74±0.15 | 38.29±1.78 |
| AG (78) | 33.11±1.17 | 3.91±0.10 | 37.03±1.22 | |
| GG (31) | 37.33±1.86 | 3.86±0.16 | 41.19±1.94 | |
| P value | 0.1605 | 0.6456 | 0.1969 | |
| rs16177219 | GG (44) | 36.73±1.55a | 3.93±0.14 | 40.66±1.62a |
| GT (78) | 32.45±1.16b | 3.84±0.10 | 36.29±1.21b | |
| TT (24) | 36.28±2.09ab | 3.79±0.19 | 40.07±2.19ab | |
| P value | 0.0361 | 0.7754 | 0.0468 | |
| rs15180009 | CC (37) | 34.55±1.70 | 3.74±0.15 | 38.29±1.78 |
| CT (78) | 33.11±1.17 | 3.91±0.10 | 37.03±1.22 | |
| TT (31) | 37.33±1.86 | 3.86±0.16 | 41.19±1.94 | |
| P value | 0.1605 | 0.6456 | 0.1969 | |
| rs313199923 | CC (50) | 34.08±1.48 | 3.79±0.13 | 37.88±1.55 |
| CT (75) | 34.80±1.21 | 3.86±0.10 | 38.67±1.2 | |
| TT (20) | 33.61±2.35 | 4.03±0.20 | 37.64±2.45 | |
| P value | 0.8744 | 0.6289 | 0.8920 | |
| rs16177126 | GG (70) | 35.62±1.32ab | 4.18±0.18 | 39.79±1.53ab |
| GA(67) | 31.19±1.94a | 3.94±0.17 | 34.47±1.20a | |
| AA (9) | 39.77±1.27b | 3.28±0.23 | 43.71±1.48b | |
| P value | 0.0388 | 0.1049 | 0.0478 | |
| rs16177212 | GG (43) | 37.04±1.56a | 3.95±0.13 | 40.99±1.63a |
| GA (79) | 32.34±1.15b | 3.83±0.10 | 36.17±1.20b | |
| AA (24) | 36.28±2.09ab | 3.79±0.18 | 40.07±2.18ab | |
| P value | 0.0345 | 0.7328 | 0.0413 | |
| rs314071117 | CC (67) | 34.49±1.27 | 3.90±0.11 | 38.39±1.33 |
| CT (65) | 34.84±1.29 | 3.88±0.11 | 38.72±1.35 | |
| TT (14) | 31.65±2.79 | 3.52±0.24 | 35.17±2.91 | |
| P value | 0.5814 | 0.3424 | 0.5362 |
QB, QP, and QT (×10−8 mol/g).
a, b within the same column with different superscripts means P < 0.05. Values in bold indicate significant association with the trait