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. 2019 Jan 23;9:395. doi: 10.1038/s41598-018-36630-7

Table 1.

The general utility and amplification profile of 21 SSR primer pairs based on a capillary electrophoresis (CE) detection platform.

No. Markersa Size range (bp) Number of original bands Number of detected bands Absent alleles (bp)b New alleles (bp)b PIC
1 SMC119CG 104–135 5 6 ND 104 0.92
2 SMC1604SA 105–130 6 7 109,124 105,107,110 0.93
3 SMC1751CL 132–160 5 7 ND 132,138 0.94
4 SMC18SA 135–150 5 6 ND 135 0.93
5 SMC22DUQ 125–165 7 8 125 142146 0.94
6 SMC24DUQ* 124–150 6 10 ND 124,133,139,150 0.95
7 SMC278CS 138–182 9 9 140,153,176 138,164,172 0.94
8 SMC31CUQ* 135–180 11 12 138 135,169 0.95
9 SMC334BS 143–165 6 7 ND 143 0.94
10 SMC336BS* 140–185 11 10 154 0 0.95
11 SMC36BUQ 100–125 3 4 ND 102 0.80
12 SMC486CG 220–245 5 5 227 235 0.91
13 SMC569CS 165–225 5 5 167,170,222 165,202 0.82
14 SMC597CS* 140–180 11 13 ND 150,152 0.95
15 SMC703BS* 200–225 9 11 ND 204,218 0.95
16 SMC7CUQ 140–170 6 7 158 143,160 0.90
17 SMC851MS 125–145 6 7 ND 138 0.94
18 mSSCIR3* 140–190 10 10 141,145 149,169 0.95
19 mSSCIR43* 200–255 9 10 209 203,229 0.95
20 mSSCIR66 120–145 4 7 ND 125,136,142 0.94
21 mSSCIR74 210–232 5 6 ND 214 0.94
Total 144 167
Average 7.95 0.92

aCore primer was marked with asterisk (*).

bAbsent and new alleles detected in this study comparing with the 144 alleles Pan30; ND, no data.