Table 1. Binding free energies of Cpd-5 in WT and mutant systems (kcal/mol).
| Name | ΔEvdW | ΔEelec | ΔGGB | ΔGSA | ΔGcalc | IC50 (nM) |
|---|---|---|---|---|---|---|
| Mps1WT | −73.57 ± 4.62 | −26.98 ± 7.14 | 49.74 ± 5.95 | −8.92 ± 0.48 | −59.73 ± 4.72 | 33.2 |
| Mps1I531M | −62.15 ± 3.78 | −27.71 ± 7.11 | 47.89 ± 5.56 | −7.91 ± 0.41 | −51.89 ± 4.14 | 119.0 |
| Mps1I598F | −63.28 ± 5.09 | −28.04 ± 7.15 | 47.37 ± 5.66 | −7.72 ± 0.55 | −52.00 ± 4.61 | 72 |
| Mps1C604Y | −61.16 ± 3.89 | −30.23 ± 5.44 | 49.61 ± 4.63 | −7.98 ± 0.36 | −49.77 ± 3.67 | 374.8 |
| Mps1S611R | −66.43 ± 4.28 | −27.79 ± 6.75 | 47.75 ± 4.51 | −8.18 ± 0.42 | −54.66 ± 3.74 | 129.9 |
Notes.
- ΔEvdW
- Van der Waals energy
- ΔEele
- electrostatic energy
- ΔGGB
- electrostatic contribution to solvation
- ΔGSA
- non-polar contribution to solvation
- ΔGcalc
- binding free energy
- IC50
- half maximal inhibitory concentration