Table 5. Binding free energy predicted using MM/PBSA calculation for 18, 21 and panduratin A.
Energy Component | Binding Free Energy (kcal/mol) | ||
---|---|---|---|
Compound 18 | Compound 21 | Panduratin A | |
Polar component electrostatics | -30.05 ± 8.77 | -264.23 ± 17.87 | -1.90 ±6.37 |
Electrostatics solvation | 42.54 ± 8.73 | 292.37 ± 17.63 | 14.21 ± 4.22 |
Non-polar component van der Waal | -26.22 ± 2.6 | -44.36 ± 2.83 | -21.18 ± 2.54 |
Non-polar solvation | -2.66 ± 0.15 | -4.73 ± 0.10 | -2.40 ±0.17 |
TOTAL Binding Free energy | -16.37 ± 3.22 | -20.95 ± 4.12 | -11.27 ± 2.99 |