Antibodies |
|
Anti-YAP |
Santa Cruz Biotechnology |
Cat# sc-101199, RRID:AB_1131430
|
Anti-YAP |
Proteintech Group |
Cat# 13584-1-AP, RRID:AB_2218915
|
Anti-CYR61 |
Santa Cruz Biotechnology |
Cat# sc-13100, RRID:AB_2088733
|
Anti-CTGF |
Santa Cruz Biotechnology |
Cat# sc-14939, RRID:AB_638805
|
Anti-GAPDH |
Santa Cruz Biotechnology |
Cat# sc-25778, RRID:AB_10167668
|
Anti-CAV1 |
BD Biosciences |
RRID:BD610060 |
Anti-CAV2 |
BD Biosciences |
RRID:BD610684 |
Anti-HSP90 |
BD Biosciences |
Cat# 610418, RRID:AB_397798
|
Anti-panTEAD |
Cell Signaling Technology |
Cat# 13295, RRID:AB_2687902
|
Anti-YAP p127 |
Cell Signaling Technology |
Cat# 4911S, RRID:AB_2218913
|
Anti-YAP p397 |
Cell Signaling Technology |
Cat# 13619, RRID:AB_2650554) |
Anti-NF2 |
Cell Signaling Technology |
Cat# 6995S, RRID:AB_10828709
|
Anti-LATS1 |
Cell Signaling Technology |
Cat# 3477, RRID:AB_2133513
|
Anti-LATS2 |
Cell Signaling Technology |
Cat# 5888, RRID:AB_10835233
|
Anti-CAVIN1 |
Cell Signaling Technology |
RRID:Cat# 69036 |
Anti-YAP |
Abcam |
Cat# ab52771, RRID:AB_2219141
|
Anti-CAVIN1 |
Abcam |
Cat# ab48824, RRID:AB_882224
|
Anti-GFP |
Abcam |
Cat# ab6556, RRID:AB_305564
|
Anti-CAVIN3 |
Bethyl |
Cat# A302-419A, RRID:AB_1907302
|
Anti-CAVIN2 |
Atlas Antibodies |
Cat# HPA039325, RRID:AB_10805473
|
Anti-CAV1 |
Jørgen Vinten, University of Copenhagen |
See [59] |
Anti-Myc |
Cell Signaling Technology |
RRID:Cat# 2276 |
Anti-mouse IgGs |
Fisher scientific |
RRID:Cat#12102270 |
Anti-rabbit IgGs |
Fisher scientific |
RRID:Cat#1805935 |
Anti-TEAD1 |
BD Biosciences |
Cat# 610923, RRID:AB_398238
|
Anti-Goat Immunoglobulins/HRP |
DAKO |
RRID:P044901 |
Anti-Rabbit Immunoglobulins/HRP |
DAKO |
RRID:P044801 |
Anti-Mouse Immunoglobulins/HRP |
DAKO |
RRID:P044701 |
Goat anti-Rabbit IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 |
Thermo Fisher Scientific |
Cat# A-11008, RRID:AB_143165
|
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 |
Thermo Fisher Scientific |
Cat# A-11037, RRID:AB_2534095
|
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 |
Thermo Fisher Scientific |
Cat# A-11032, RRID:AB_2534091
|
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 |
Thermo Fisher Scientific |
Cat# A-11029, RRID:AB_2534088
|
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 633 |
Thermo Fisher Scientific |
Cat# A-21071, RRID:AB_2535732
|
|
Bacterial and Virus Strains |
|
Dh5-alpha E.coli
|
Sonja Vermeren, University of Edinburgh |
N/A |
One Shot Stbl3 Chemically Competent E. coli
|
Life Technologies |
C737303 |
|
Chemicals, Peptides, and Recombinant Proteins |
|
Verteporfin |
Sigma-Aldrich |
SML0534-5MG |
Puromycin |
VWR |
CAYM13884 |
G418 |
Scientific Laboratory Supplies Ltd |
G5013 |
Hygromycin B |
Scientific Laboratory Supplies Ltd |
30-240-CR |
GeneJet DNA transfection reagent |
Tebu-Bio |
189SL100488 |
LIPOD293 DNA transfection reagent |
Tebu-Bio |
189SL100668 |
DMEM |
GIBCO |
21969-035 |
FBS, heat inactivated |
GIBCO |
10500-064 |
Glutamine |
GIBCO |
25030-024 |
Penicillin/Streptomycin |
GIBCO |
15140-122 |
Immuno Western ECL mix |
millipore |
WBKLS0500 |
Antifade |
citifluor |
AF1-100 |
DMSO |
Sigma |
D2650 |
ProLong Diamond Antifade Mountant with DAPI |
Thermo Fisher Scientific |
P36962 |
Hoechst |
Thermo Fisher Scientific |
3342 |
Formaldehyde Solution, Methanol free |
Thermo Fisher Scientific |
28908 |
Polyacrylamide |
Thermo Fisher Scientific |
BP1408-1 |
|
Critical Commercial Assays |
|
RNeasy plus mini kit |
QIAGEN |
74136 |
High-capacity cDNA reverse transcriptase kit |
Applied biosciences |
4368814 |
Brilliant III Ultra-fast SYBR Green QPCR Master Mix |
Agilent Technologies |
600883 |
Dual-Glo luciferase assay system |
Promega |
E2920 |
ChIP-IT Express Enzymatic kit |
Active Motif Inc. |
53009 |
DNA Clean & Concentrator-5 |
Zymo Research |
D4003T |
|
Experimental Models: Cell Lines |
|
HEK293A |
Kun-Liang Guan lab, UCSD |
N/A |
HEK293T |
Kun-Liang Guan lab, UCSD |
N/A |
U2OS |
Jack Dixon, UCSD |
N/A |
|
Experimental Models: Organisms/Strains |
|
wwtr1 mutant zebrafish |
Link Lab, Medical College of Wisconsin |
Allele mw49 |
yap1 mutant zebrafish |
Link Lab, Medical College of Wisconsin |
Allele mw48 |
cav1 mutant zebrafish |
Poss Lab, Duke University |
Allele pd1104 |
cav3 mutant zebrafish |
Bagnat Lab, Duke University |
Allele pd1149 |
|
Oligonucleotides |
|
Please refer to Tables S1 and S2
|
N/A |
N/A |
|
Recombinant DNA |
|
Please refer to Table S3
|
N/A |
N/A |
|
Software and Algorithms |
|
Fiji |
ImageJ |
https://fiji.sc/ |
Prism |
GraphPad |
https://www.graphpad.com/scientific-software/prism/ |
Photoshop and InDesign |
Adobe |
https://www.adobe.com/uk/creativecloud.html |
Excel and Word |
Microsoft |
https://www.office.com/ |
BioRender |
BioRender |
https://app.biorender.io/ |
|
Other |
|
Quasi Vivo QV500 system |
Kirkstall |
QV500 |
PF22X0103 peristaltic pump |
Parker |
PARKER PF22X0103 |
Thermanox 13mm coverslips |
Thermo Fisher Scientific |
#174950 |
LightCycler 96 System |
Roche |
N/A |
X Ray Film 18x24cm Double Sided |
Scientific Laboratory Supplies Ltd |
MOL7016 |
ThermanoxTM 13 mm coverslips |
Thermo Fisher Scientific |
#174950 |
COVER GLASS ROUND Ø 13 MM NO.1 |
VWR International Ltd. |
631-1578 |
Immobilon(R)-P Polyvinylidene difluoride membranes,size 26.5 cm x 375 cm |
Sigma-Aldrich |
P2938-1ROL |