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. 2019 Jan 24;5:4. doi: 10.1038/s41540-018-0080-1

Table 2.

List of the different models, their variation compared to the previous model, and the outcome or idea for the next model

Model no. Variation compared to previous model Features/limitations Required improvements
01 Basic model Strong HP deflection at day/night transition Better map day/night transition
02 Adjusted starch synthesis and degradation (r3 and r4) Sharp deviance of CaAa pool at day/night transition Introduce a constant respiration rate
03 Constant respiration rate during day and night Split carbon pools to converge closer to the in vivo condition
04 Split carbon pool into a citrate and combined malate/fumarate pool increased dynamics for Cit and MalFum Interconversion of Cit and MalFum as in the TCA cycle
05 Interconversion between Cit and MalFum Long simulation times (up to 8 h per simulation) Splining of enzyme parameters to reduce simulation time
06 Splines for Vm values for sucrose cycling enzymes Flat dynamics for Glc and Frc Splining of selected enzyme parameters
07 Spline for SPS and Inv Shorter simulation times (up to 4 h per simulation) Exact distribution of excess carbon to shoot or root
08 Implementing the calculated SC gain Final model

HP hexose phosphates, CaAa carbonic- and amino acids, Cit citrate, MalFum malate and fumarate pool, Glc glucose, Frc fructose, SPS sucrose-phosphate-synthase, Inv invertase, SC structural carbon