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. 2019 Jan 24;5:4. doi: 10.1038/s41540-018-0080-1

Table 4.

Description of parameters and constraints used in the models and their respective source whenever available

Name Symbol Constraints/range Reference/note
SPS KM KM5 0.1– 2 25, 52, 53 ,
Spinacia oleracea
Pisum sativum
Inv KM KM6 7–13 54
Arabidopsis thaliana Oy-0
Hxk KM for GlcK activity KM7 1.1–0.2 55, 56
(0.01–2 for gin2-1) Helianthus annuus, various
Hxk KM for FrcK activity KM8 0.1–3 (0.1–5 for gin2-1) 55, 56
Helianthus annuus, various
Inv Ki for Frc inhibition Ki6a 0.001–10 57
Lolium temulentum
Inv Ki for Glc inhibition Ki6b 0.001–10 Assumed and optimized
Hxk Ki for Frc inhibition Ki7 0.01–10 Assumed and optimized
Hxk Ki for Glc inhibition Ki8 0.001–10 Assumed and optimized
SPS maximal reaction rate Vm5 10–20 for both Measured
Inv maximal reaction rate Vm6 60–100 for Ler Measured
70–120 for gin2-1
GlcK maximal reaction rate Vm7 2–4 for Ler Measured
0–1 for gin2-1
FrcK maximal reaction rate Vm8 5–10 for Ler Measured
2–5 for gin2-1
Photosynthesis rate r1 Measured and splined
respiration rate r2 −28.6 for Ler N Measured
−37.5 for gin2-1 N
−44.0 for Ler HL
−47.5 for gin2-1 HL
Rate of starch synthesis r3 1–7.5 for N Measured and splined
5–26 for HL
Rate of starch degradation r4 −4 to −10 for N Measured and splined
−6 to −20 for HL
SPS activity as MM r5 (Vm5∙HP)/(km5 + HP) Measured and splined
Inv activity as MM r6 (Vm6∙Suc)/((km6∙(1 + Frc/Ki6a) + Suc)∙(1 + Glc/Ki6b)) Measured and splined24,47,49
GlcK activity as MM r7 (Vm7 ∙Glc)/(km7 ∙(1 + Frc/Ki7) + Glc) Measured and splined49
FrcK activity as MM r8 (Vm8 ∙Frc)/(km8∙ (1 + Glc/Ki8) + Frc) Measured and splined49
Aa synthesis from Cit as MBE r9 r_ca ∙Cit Assumed and optimized
r_ca ∈ {0.01,100}
SC formation from Aa as MBE r10 a_ba∙Aa Assumed and optimized
a_ba ∈ {0,1}
SC formation from HP as MBE r11 ab_hp∙HP Assumed and optimized
ab_hp ∈ {0.0001,100}
Exp rate from Aa as MBE r12 aa_e∙Aa Assumed and optimized
aa_e ∈ {0.0001,10}
Exp rate from Suc as MBE r13 a_e∙Suc Assumed and optimized
a_e ∈ {0.0001,10}
Cit formation from HP as MBE r14 hp_c∙HP Assumed and optimized
hp_c ∈ {0.01,10}
MF formation from HP as MBE r15 hp_mf∙HP Assumed and optimized
hp_mf ∈ {0.01,10}
MF formation from Cit as MBE r16 cit_mf∙Cit Assumed and optimized
cit_mf ∈ {0.01,10}
Cit formation from MF as MBE r17 mf_cit∙MF Assumed and optimized
mf_cit ∈ {0.01,10}

SPS sucrose-phosphate-synthase, Inv invertase, Hxk hexokinase, GlcK glucokinase, FrcK fructokinase, Frc fructose, Glc glucose, HP hexose phosphate, Exp export, SC structural carbon, Suc sucrose, Cit citrate, MF malate/fumarate, Aa amino acids, MM Michaelis–Menten kinetic, MBE mass balance equation. KM are given in mM and Vm in µmol h−1 gFW−1