Table 3.
Properties of the different metrics of F. The theoretically possible range and the expected mean are listed. Observed mean, variance, minimum and maximum were calculated for each of the 280 demes simulated in this study, and their means (e.g., the mean of all 280 observed minima) are reported in this table
Metric of F | Based on | Possible range | Expected mean | Observed mean | Observed variance | Observed minimum | Observed maximum |
---|---|---|---|---|---|---|---|
F ped | Pedigree | [0, 1] | Positive | 0.0878 | 0.0016 | 0.0005 | 0.3276 |
F ROH | Runs of homozygosity | [0, 1] | Positive | 0.0925 | 0.0024 | 0.0002 | 0.4095 |
F H | Hardy–Weinberg expectation | (−∞, ∞) | 0 | −0.0005 | 0.0039 | −0.1625 | 0.3560 |
F alt | Hardy–Weinberg expectation and weight on rare homozygotes | (−∞, ∞) | 0 | −0.0047 | 0.0022 | −0.0806 | 0.3432 |