Table 1.
Transcript Assembly Metrics for the Transcriptomic Library Generated from the brain of male and female Amami spiny rats
| Categories | Number of Reads or Percentage |
|---|---|
| Total Assembly Lengtha | 478,202,943 |
| Number of Assembled Transcriptsa | 569,369 |
| Mean Transcript Lengtha | 839.88 |
| Transcript N50a | 1751 |
| N Transcripts > 1 k nta | 116,192 |
| Longest Transcripta | 22,701 |
| N Transcripts with an identifiable ORFa | 80,210 |
| BUSCO: Completeb | 76.4% |
| BUSCO: Complete Single Copyb | 29.4% |
| BUSCO: Complete Duplicatedb | 47% |
| BUSCO: Fragmentedb | 16.1% |
| BUSCO: Missingb | 7.5% |
| N BUSCO orthologs (vertebrate) b | 4104 |
aValue generated with TransRate (17)
bValue generated with BUSCO software (18)