Figure S3.

Phylogenetic Trees for All SGBs and Reference Genomes and Subtrees of Saccharibacteria and Archaea, Related to Figure 1

(A) Phylogenetic tree that includes the representatives of the SGBs presented in Figure 1A together with all the non-human bins (represented in white in the external rings), for a total of 16,332 genomes (15,299 after the internal quality control in PhyloPhlAn). (B) Phylogenetic tree of the 337 reconstructed genomes taxonomically assigned to the candidate phylum Saccharibacteria present in the 108 SGBs, including available reference genomes (publicly available reference genomes are labeled with the “GCA” prefix). (C) Phylogenetic tree of the 675 archaeal genomes reconstructed in this study. 487 genomes belong to the Methanobrevibacter smithii kSGB (ID 714).