Table 2.
Sequences of primers used for detection of virulence genes.
Gene | Primer sequence (5’–3’), F/R | Amplicon size (bp) | Tm (°C) | Reference |
---|---|---|---|---|
rmpA | ACTGGGCTACCTCTGCTTCA CTTGCATGAGCCATCTTTCA | 535 | 54 | Siu et al., 2011 |
fimH-1 | TGCTGCTGGGCTGGTCGATG GGGAGGGTGACGGTGACATC | 550 | 61 | Schembri et al., 2005 |
mrkD | CCACCAACTATTCCCTCGAA ATGGAACCCACATCGACATT | 226 | 54 | El Fertas-Aissani et al., 2013 |
iutA | GGGAAAGGCTTCTCTGCCAT TTATTCGCCACCACGCTCTT | 920 | 56 | Compain et al., 2014 |
entB | CTGCTGGGAAAAGCGATTGTC AAGGCGACTCAGGAGTGGCTT | 385 | 57 | Wasfi et al., 2016 |
ybtS | GACGGAAACAGCACGGTAAA GAGCATAATAAGGCGAAAGA | 242 | 52 | Compain et al., 2014 |
K1 | GGTGCTCTTTACATCATTGC GCAATGGCCATTTGCGTTAG | 1283 | 47 | Fang et al., 2007 |
K2 | GGATTATGACAGCCTCTCCT CGACTTGGTCCCAACAGTTT | 908 | 45 | Fang et al., 2007 |