Skip to main content
. 2019 Jan 28;9:806. doi: 10.1038/s41598-018-37512-8

Table 2.

Annotation of variables with VIP values higher than 1.35 (highlighted in bold) in at least a pairwise PLS-DA model from the CE-MS metabolomics analysis of PKD samples.

Level of assignment Annotation Abbreviation Migration time (min) Detected specie Experimental m/z m/z error VIP values of PLS-DA
Wt0 vs Wt14 Wt0 vs MCK MCK vs ESCK
Confirmed with standard Creatinine Cre 13.4 [M+H]+ 114.0671 115.0697 0.9 mDa 2.03 1.75 1.56 1.29 1.30 1.36
Carnitine Carn 15.4 [M+H]+ 163.1159 (isotopic profile of 162.1139) 164.1173 1.4 mDa 0.37 0.31 0.91 0.95 1.55 1.58
Creatine Cr 17.0 [M+H]+ 133.0796 (isotopic profile of 132.0782) 1.4 mDa 1.49 1.42 0.20
Glutamine Gln 21.0 [M-NH3+H]+ 130.0503 0.5 mDa 1.27 1.42 0.59
Betaine Btn 22.9 [M+H]+ 119.0899 (isotopic profile of 118.0884) 2.1 mDa 0.12 0.44 1.39
Tentative annotation 1-methylhistidine mHis 14.6 [M+H]+ 170.0925 171.0955 0.1 mDa 2.31 2.29 2.17 2.20 0.25 0.26
Acetylcholine Ach 14.7 [M+H]+ 146.1178 0.2 mDa 0.91 1.47 0.72
4-Guanidinobutanoic acid Gba 15.0 [M+H]+ 146.0927 0.3 mDa 1.04 1.44 1.65
2-Aminooctanoic acid AoA 15.2 [M+H]+ 160.1334 161.1367 0.2 mDa 1.53 1.54 1.81 1.86 0.94 0.96
Methylguanine (different isomers are possible) mGu 15.2 [M+H]+ 166.0725 0.2 mDa 0.46 0.61 1.55
γ-L-Glutamylputrescine or N5-(1-imino-3-butenyl)-L-ornithine Gput 15.4 [M-H2O+H]+ 200.1393 0.6 mDa 1.55 1.71 1.01
Formylisoglutamine fGln 15.4 [M+H]+ 175.0715 0.2 mDa 0.14 1.04 1.60
Imidazolelactic acid ILA 16.3 [M+H]+ 157.0609 0.1 mDa 1.66 1.66 0.73
Asn-Hydroxyproline or Hydroxyprolyl-Asn P1 16.5 [M+H]+ 246.1083 0.1 mDa 1.41 1.29 1.57
Argininic acid ArgA 16.5 [M+H]+ 176.1030 0.0 mDa 0.20 0.19 1.65
Propionyl-L-carnitine Pcarn 16.6 [M+H]+ 218.1386 219.1417 0.1 mDa 1.36 1.37 0.92 0.90 1.28 1.27
Homocitrulline Hcit 16.8 [M+H]+ 190.1185 0.1 mDa 1.09 0.30 1.64
Glycyl-lysine or lysyl-glycine P2 17.4 [M+H]+ 204.1342 0.1 mDa 0.68 0.28 1.63
N-α-Acetyl-L-arginine Aarg 17.7 [M+H]+ 217.1286 0.9 mDa 1.75 0.82 1.54
3-Hydroxyisovalerylcarnitine HIVC 17.7 [M+H]+ 262.1647 0.2 mDa 2.07 0.43 1.47
(1) Phe-Thr or Thr-Phe (2) Hydroxyproline-Leu(Ile), or Leu(Ile)-Hydroxyproline P3 18.5 [M+H]+ (1) [M+Na]+ (2) 267.1339 268.1370 0.9 mDa 1.70 1.68 1.57 1.86 1.61 1.65
2-[3-carboxy-3-(methylammonio)propyl]-L-histidine CMHis 19.0 [M+H]+ 271.1400 0.1 mDa 0.52 1.27 1.64
Proline betaine ProB 23.1 [M+H]+ 144.1023 0.4 mDa 1.86 2.18 1.39
γ-carboxyglutamic acid Gla 32.1 [M+H]+ 192.0501 0.2 mDa 1.26 0.83 1.35
5-Hydroxyindoleacetylglycine hINaG 32.1 [M-H2O+H]+ 231.0764 0.6 mDa 1.88 1.67 1.56
Pantothenic acid PA 32.2 [M-H2O+H]+ 202.1074 0.5 mDa 0.06 0.15 1.45