Table 3.

False positive rates (FPR) for wTO and Spearman correlation networks obtained from random gene expression data

Percentile	Cut-off value (Spearman)	Cut-off value (wTO)	Quality (points)	FPR (Spearman)	FPR (wTO)
90	.5879	.4826	10	7.3·10−2	0
95	.6848	.5202	10	3.5·10−2	0
99	.8303	.6321	10	4.7·10−3	0
90	.5879	.4826	20	7.4·10−3	0
95	.6848	.5202	20	1.2·10−3	0
99	.8303	.6321	50	9.2·10−7	0
90	.5879	.4826	50	1.0·10−5	0
95	.6848	.5202	50	1.0·10−7	0
99	.8303	.6321	50	0	0
90	.5879	.4826	338	0	0
95	.6848	.5202	338	0	0
99	.8303	.6321	338	0	0

The “Percentile” column refers to the basis for false positive threshold, as the corresponding percentile of each metric in the whole-blood data set