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. Author manuscript; available in PMC: 2020 Feb 1.
Published in final edited form as: J Pharm Sci. 2018 Oct 16;108(2):791–797. doi: 10.1016/j.xphs.2018.10.017

Table 1.

Photo-reactive reagents and their applications

Reagent1 Applications2 Advantages Disadvantages Refs
Phenyl Azides
 p-azido-L-phenylalanine PPI - Structural similarities to phenylalanine - Short wavelength light required
- Low labeling yield
- Unexpected side products
7
 ABAS-12C6/13C6 PS 5
 TmfdPhe NR 50
Carbenes
 Photo Leu PPI, PMI - Small size
- High labeling efficiency
- Activation wavelength safe for proteins
- Unexpected side products 1, 6, 44, 45
 Photo Met PPI 1, 44, 45
 AbK PPI 46
 Photo Lys PPI 47
 TmdZLys PPI 48
 TFMD PA 59
 NHS-SDA PS, PMI 5, 22
 DA-2 PLB 54
Benzophenones
 pBpA PPI, PLB, PDB - Genetically encoded - Limited structural flexibility 2729, 49
 CBS-12C6/13C6 PS 5
Other Reagents
 Cyclopropenone Click - Largely unknown - Largely unknown 36
 ACT Target ID 37
 AdoMet Labeling 3942
1

See text for abbreviations and full chemical names.

2

Abbreviations: PPI = protein-protein interactions, PS = protein structure determination, NR = none reported, PMI = protein-matrix interactions in solid samples, PA = protein aggregates, PLB = protein-ligand binding, PDB = protein-DNA binding, Click = photo-activated click chemistry, Target ID = drug target identification, Labeling = labeling of methyltransferases and DNA.