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. 2019 Jan 29;9:898. doi: 10.1038/s41598-018-38021-4

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Characteristics of the de novo assembly genomic features in C. militaris (HN strain). (a) The 14 contigs with the complete chromosomes are labeled with red stars. (b) Plots of the m6A motif distributions. The orange color represents m6A in the plus strain, the brown color represents m6A in the minus strain and the black color shows the overlap of brown with orange and shows that m6A exists in both strains. (c) Plots of the m4C motif distributions. The purple color represents m4C in the plus strain and the blue color represents m4C in the minus strain. (d) The distribution of the GC content: the red color represents a GC content >50% and the green color represents a GC content <50%. (e) Density distribution of repeat elements. (f) Density distribution of genes. (g) Genome duplication: regions sharing >90% sequence similarity over 5 kb are connected by red lines; those with >90% similarity over 10 kb are connected by blue lines.