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. 2019 Jan 30;14(1):e0211623. doi: 10.1371/journal.pone.0211623

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© 2019 Tian et al

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Fig 5 — Protein sequences were aligned by DNAMAN version 9.0. The phylogenetic tree was constructed using the maximum-likelihood method with full-length protein sequences. Species names and accession numbers are indicated: Zea mays, ZmCCA1 (ACG26686); A. thaliana, AtCCA1.1 (NP_850460), AtCCA1.2 (NP_001318437); Sorghum bicolor, SbCCA1 (LOC8080836); Setaria italica, SiLHY (LOC101764638); Oryza sativa Japonica Group, OsLHY.1 (XP_015649835), OsLHY.2 (XP_015649844), OsLHY.3 (XP_015649846), OsLHY.4 (XP_015649847); Oryza brachyantha, ObCCA1.1 (XP_006659138), ObCCA1.2 (XP_006659145), ObCCA1.3 (XP_015695906); Brachypodium distachyon, BdCCA1 (LOC100838310). Scale bar indicates 0.2 of amino acid substitutions per site.