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. 2019 Jan;11(Suppl 1):S113–S126. doi: 10.21037/jtd.2018.12.18

Table 2. Comparison of the most widely used ctDNA testing methodologies.

Test Detection limit Advantages Disadvantages
Allele-specific PCR 0.1–1% Easy to set-up Detection of small number of alterations per sample
Short time to result Lower sensitivity
FDA approved/CE-IVD kits available
Specific equipment not always required
Low cost
Digital PCR 0.01–0.1% (49,50) High sensitivity Detection of small number of alterations per sample
Short time to result Dedicated equipment necessary
Low cost of reagents
Absolute quantification (copies/mL)
NGS 0.01–2% Large coverage Reagents more expensive
High sensitivity (if deep sequencing methods are used) Dedicated equipment necessary
Longer turn-around time
Relative quantification (allelic fraction)

NGS, next generation sequencing.