Table 5.
Ramachandran plot calculation using rampage server.
| Server | Ramachandran plot calculation | Bradyrhizobium japonicum | Rhizobium leguminosarum | Mesorhizobium ciceri |
|---|---|---|---|---|
| Phyre2 | Number of residues in favoured region | 85.3% | 92.1% | 93.4% |
| Number of residues in allowed region | 8.5% | 6.5% | 4.6% | |
| Number of residues in outlier region | 6.2% | 1.4% | 2.0% | |
| Swiss model | Number of residues in favoured region | 96.5% | 92.9% | 92.3% |
| Number of residues in allowed region | 3.1% | 6.3% | 6.5% | |
| Number of residues in outlier region | 0.4% | 0.8% | 1.1% | |
| Modeller | Number of residues in favoured region | 95.0% | 93% | 93.1% |
| Number of residues in allowed region | 3.0% | 3.7% | 3.7% | |
| Number of residues in outlier region | 2.0% | 3.4% | 3.1% |