Skip to main content
. 2019 Jan 17;11(1):75. doi: 10.3390/v11010075

Table 1.

Primer sequences employed for Crimean Congo hemorrhagic fever virus (CCHFV) N amplification and plasmid construction. Underlined bold letters indicate up- and down-stream homologous sequences of the plasmid multiple cloning site (EcoRI) of the pVAX-1 vector used in the Seamless Ligation Cloning Extract (SLiCE) cloning method.

Name Sequence (5′-3′)
CCHFV-N-F a atggaaaacaagatcgagg
CCHFV-N-R a aggaggagaaaagctgaa
pVAX-SliCE-N-F b taagcttggtaccgagctcggatccactagtccagtgtggtggaccatggaaaacaagatcgagg
pVAX-SliCE-N-R b actcgagcggccgccactgtgctggatatctgcagaattaggaggagaaaagctgaa
CD24-F c acccacgcagatttattcca
CD24-R c accacgaagagactggctgt
RE-N-F d gaattcatggaaaacaagatcgagg
RE-N-R d ctcgagaggaggagaaaagctgaa
qPCR-F ggacataggtttccgtgtca
qPCR-R tccttctaatcatgtctgacagc
qPCR-probe FAM-agaacaacttgccaattaccaacaggc-BHQ1

a Based on the CCHFV Turkey-Kelkit06 complete sequence (GenBank accession: GQ337053). b Underlined bold letters indicate homologous recombination sequences.: c Based on the CD24-expressing Open Reading Frame (ORF) (GenBank accession: NM013230). d Underlined regular letters indicate restriction endonuclease recognition sites (EcoRI and XhoI).