. 2019 Jan 21;10(1):71. doi: 10.3390/genes10010071

Table 1.

STP family genes in Brassica oleracea and corresponding orthologs in Arabidopsis thaliana.

Group	tPCKChr	CCB	Arabidopsis thaliana				Brassica oleracea
Group	tPCKChr	CCB	Gene Name	Gene ID	ORF (bp)	PL (aa)	Gene Name	Gene ID	Chromosome	Subgenome	ORF (bp)	PL (aa)	MW (kD)	pI	Instability Index	Aliphatic Index	GRAVY	SCLpred
Clade I	tPCK1	A	AtSTP1	AT1G11260	1569	522	BoSTP1a	Bol036657	C05	LF	1569	522	57.60	9.22	38.45	102.87	0.49	cell membrane
							BoSTP1b	Bol031302	C08	MF2	1566	521	57.47	9.29	39.98	102.15	0.48	cell membrane
	tPCK7	X	AtSTP3	AT5G61520	1545	514	BoSTP3	Bol017006	C06	LF	1512	503	54.76	9.12	40.17	100.95	0.45	cell membrane
	tPCK1	B	AtSTP5	AT1G34580	1521	506	BoSTP5	Bol009461	Scaffold000233	MF1	1521	506	54.43	9.28	30.06	109.13	0.69	cell membrane
	tPCK4	U	AtSTP12	AT4G21480	1509	502	BoSTP12	Bol028422	C01	LF	1542	513	56.62	8.70	30.38	106.57	0.56	cell membrane
Clade II	tPCK2	F	AtSTP4	AT3G19930	1545	514	BoSTP4a	Bol018147	C05	LF	1545	514	57.12	8.72	38.81	102.80	0.58	cell membrane
							BoSTP4b	Bol000550	Scaffold000531	MF1	1545	514	56.99	8.99	38.20	102.80	0.56	cell membrane
	tPCK1	C	AtSTP9	AT1G50310	1554	517	BoSTP9a	Bol010165	C07	LF	1551	516	56.27	6.89	32.15	99.01	0.53	cell membrane
							BoSTP9b	Bol014014	Scaffold000180	MF2	1551	516	56.15	6.89	33.77	101.67	0.54	cell membrane
	tPCK2	F	AtSTP10	AT3G19940	1545	514	BoSTP10	Bol000549	Scaffold000531	MF1	1536	511	56.16	8.60	30.51	97.50	0.48	cell membrane
	tPCK7	Q	AtSTP11	AT5G23270	1545	514	BoSTP11	Bol017091	C06	LF	1569	522	57.17	5.79	33.58	105.50	0.55	cell membrane
Clade III	tPCK1	A	AtSTP2	AT1G07340	1497	498	BoSTP2a	Bol023380	C08	MF1	1497	498	55.48	9.27	38.43	105.52	0.50	cell membrane
							BoSTP2b	Bol041122	C05	LF	1500	499	55.42	9.29	33.25	105.51	0.52	cell membrane
	tPCK2	F	AtSTP6	AT3G05960	1524	507	BoSTP6a	Bol002474	Scaffold000387	MF1	1524	507	55.86	8.76	31.67	109.98	0.65	cell membrane
							BoSTP6b	Bol002866	Scaffold000372	LF	1515	504	55.59	8.29	31.06	109.50	0.65	cell membrane
							BoSTP6c	Bol034076	Scaffold000040	MF2	1527	508	55.71	8.33	30.72	112.48	0.61	cell membrane
	tPCK7	Q	AtSTP8	AT5G26250	1524	507	BoSTP8	Bol022297	C06	LF	1452	483	53.34	8.94	32.79	112.63	0.64	cell membrane
Clade IV	tPCK5	O	AtSTP7	AT4G02050	1542	513	BoSTP7a	Bol030687	C03	MF1	1542	513	55.76	9.03	32.99	105.89	0.47	cell membrane
							BoSTP7b	Bol011395	C09	LF	1527	508	55.09	8.83	35.14	110.18	0.53	cell membrane
	tPCK7	Q	AtSTP13	AT5G26340	1581	526	BoSTP13a	Bol022294	C06	LF	1536	511	55.95	9.31	34.63	112.94	0.59	cell membrane
							BoSTP13b	Bol032462	C09	MF2	1599	532	58.04	9.30	32.58	106.65	0.49	cell membrane
	tPCK6	E	AtSTP14	AT1G77210	1515	504	BoSTP14	Bol027572	C07	LF	1038	345	38.33	8.47	45.45	112.46	0.51	cell membrane

NottPCK Chr: Chromosome of translocation Proto-Calepineae Karyotype, ancestral genome of Brassica species, CCB: Conserved collinear block, LF: The least fractionated blocks of Brassica, MF1: The medium fractionated blocks of Brassica, MF2: The most fractionated blocks of Brassica, ORF: Open reading frame, PL: Protein length, MW: Molecular weight, pI: Isoelectric point, GRAVY: Aliphatic index and grand average of hydropathicity, SCLpred: Predicted subcellular localization; STP: Sugar transporter protein.