Table 3.
The general characteristics of five Rosa chloroplast genomes.
| Characteristics | R. multiflora | R. luciae | R. maximowicziana | R. roxburghii | R. odorata var. gigantea |
|---|---|---|---|---|---|
| GenBank accession number | MG727863 | MG727864 | MG727865 | NC_032038 | KF753637 |
| Reference | This study | This study | This study | Wang et al., 2018 [23] | Yang et al., 2014 [25] |
| Total cpDNA size (bp) | 156,519 | 156,506 | 156,405 | 156,749 | 156,634 |
| LSC size (bp) | 85,643 | 85,631 | 85,529 | 85,852 | 85,767 |
| SSC size (bp) | 18,760 | 18,759 | 18,760 | 18,791 | 18,761 |
| IR size (bp) | 26,058 | 26,058 | 26,058 | 26,053 | 26,053 |
| Number of different genes | 114 | 114 | 114 | 115 | 116 (115 *) |
| Number of different protein-coding genes | 80 | 80 | 80 | 81 | 81 |
| Number of different tRNA genes | 30 | 30 | 30 | 30 | 31 (30 *) |
| Number of different rRNA genes | 4 | 4 | 4 | 4 | 4 |
| GC content (%) | 37.2 | 37.2 | 37.2 | 37.2 | 37.2 |
| GC content of LSC (%) | 35.2 | 35.2 | 35.2 | 35.2 | 35.2 |
| GC content of SSC (%) | 31.3 | 31.3 | 31.3 | 31.3 | 31.3 |
| GC content of IR (%) | 42.7 | 42.7 | 42.7 | 42.7 | 42.7 |
cpDNA: chloroplast DNA; LSC: large single-copy region; SSC: small single-copy region; IR: inverted repeat; * The number of the genes after additional verification.