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. 2019 Jan 28;12:4. doi: 10.1186/s12284-018-0258-6

Table 3.

QTLs common across traits for the three panels. A – full panel; B – indica subpanel; C – japonica subpanel (P-values of the QTLs detected as significant at P < 5e-04)

QTLs Chr Position Nb ass. RWC_T0 RWC_T1 RWC_T2 RWC_T3 RWC_T4 RWC_S1 RWC_S2 RWC_S3 RWC_S4 Score1 Score2 Score3 Score4 Recovery RCGR
A. Full panel
 q1 1 23,006,901 1 3.2E-04
23,083,234 2 4.9E-05 2.5E-04
 q2 1 24,510,022 1 1.7E-04
24,533,617 1 6.1E-05
24,563,013 1 6.1E-05
 q4 5 15,011,955 1 1.9E-05
15,023,372 1 5.4E-05
15,034,791 1 3.8E-04
15,064,145 1 5.1E-05
15,064,148 1 5.1E-05
15,089,160 1 2.8E-04
15,092,328 1 2.8E-04
15,152,887 1 2.9E-04
15,555,144 1 2.9E-04
15,756,028 1 2.8E-04
15,801,387 1 4.4E-04
 q5 6 17,849,604 1 4.9E-05
 q6 7 17,904,510 1 5.7E-05
17,904,513 2 4.7E-04 5.7E-05
17,947,305 2 1.9E-04 2.5E-05
17,947,308 2 1.9E-04 2.5E-05
 q7 7 19,695,647 1 1.5E-05
 q8 7 20,730,455 1 5.4E-05
20,791,018 1 2.6E-04
 q9 8 298,529 2 3.4E-04 3.2E-04
415,144 6 1.9E-05 2.1E-04 1.5E-04 1.8E-04 7.5E-05 6.5E-05
 q10 8 4,048,851 1 1.8E-04
4,053,013 1 7.2E-05
 q12 11 2438,402 1 4.1E-04
2,440,016 2 1.5E-04 4.9E-04
2,441,445 1 4.1E-04
2,444,894 2 1.0E-04 4.8E-04
2,444,897 1 2.8E-04
2,445,085 1 2.5E-04
2,446,180 1 2.5E-04
 q13 11 6,647,262 3 5.1E-06 2.0E-05 4.9E-04
 q13* 11 6,662,124 3 2.5E-04 3.7E-04 3.1E-04
6,691,388 3 2.6E-04 2.8E-04 4.2E-04
6,691,391 3 4.4E-04 4.6E-04 3.5E-04
6,706,811 4 1.2E-04 4.6E-04 2.2E-04 8.5E-05
6,887,831 3 1.2E-04 1.3E-04 3.9E-04
 q14 11 6,934,618 2 4.1E-06 6.0E-06
 q15 11 7,603,100 2 2.2E-04 7.2E-05
 q16 11 15,692,357 1 4.0E-04
15,692,360 1 4.0E-04
15,712,256 1 4.0E-04
15,796,210 2 4.9E-04 8.2E-05
 q17 11 19,980,023 1 1.9E-05
20,322,700 1 1.9E-05
B. Indica subpanel
 q1 1 22,974,974 1 1.4E-05
23,006,901 2 2.4E-05 4.0E-04
23,083,234 2 2.4E-05 4.0E-04
23,151,112 2 2.4E-05 4.0E-04
23,168,543 1 6.6E-05
23,351,413 2 4.9E-04 3.6E-04
 q4 5 15,011,955 1 1.6E-04
15,023,372 1 3.1E-04
15,064,145 1 3.8E-04
15,064,148 1 3.8E-04
 q6 7 17,904,510 2 2.3E-04 1.3E-04
17,904,513 2 2.3E-04 1.3E-04
17,912,789 1 2.8E-04
17,947,305 2 8.3E-05 6.4E-05
17,947,308 2 8.3E-05 6.4E-05
 q9 8 298,529 1 3.1E-04
415,144 6 1.3E-05 5.6E-06 1.9E-04 4.6E-06 3.5E-04 5.6E-05
 q11 10 10,281,766 1 1.8E-05
 q12 11 2438,402 1 1.8E-04
2,440,016 3 6.8E-05 1.4E-04 2.5E-04
2,441,445 1 1.8E-04
2,444,894 4 5.9E-05 1.1E-04 3.0E-04 9.8E-05
2,444,897 2 1.6E-04 2.1E-04
2,445,085 3 1.6E-04 2.2E-04 9.0E-05
2,446,177 2 3.1E-04 2.5E-04
2,446,180 3 1.6E-04 2.2E-04 9.0E-05
 q13 11 6,647,262 3 4.6E-05 4.2E-04 1.3E-04
 q14 11 6,934,618 2 6.0E-05 6.3E-05
 q15 11 7,603,100 1 3.5E-04
 q16 11 15,796,210 1 3.8E-04
 q17 11 19,980,023 1 8.2E-05
20,322,700 1 8.2E-05
C. Japonica subpanel
 q2 1 24,502,190 1 8.3E-05
24,510,022 1 8.3E-05
24,533,617 1 8.3E-05
24,563,013 1 8.3E-05
 q3 2 35,019,983 1 1.9E-04
35,082,166 1 5.5E-05

RWC_T0 relative water content before drought treatment, RWC_T1 to RWC_T4 relative water content after 1 to 4 weeks of drought stress, RWC_S1 to RWC_S4 slope of relative water content after 1 to 4 weeks of drought stress, Score1 to Score4 drought sensitivity score after 1 to 4 weeks of drought stress, Recovery recovery ability, RCGR relative crop growth rate