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. 2019 Jan 17;20(2):390. doi: 10.3390/ijms20020390

Table A3.

The selected individual genes with a corresponding functional annotation from the Required, Corrected, HsfA2-dependent; WT genotypic adaptation, or Compensated; HSFA2 KO genotypic adaptation presented on Figure 5C–F. Cells highlighted in red indicate upregulation; in green indicate downregulation. Cells marked with “x” indicate no statistically significant differential expression.

Category Transcript ID Gene Symbol Gene Description Functional Annotation FWt : GWT FC log2 FHsf : GHsf FC log2 GHsf : GWt FC log2 FHsf : FHsf FC log2
Required At1g02980 CUL2 cullin 2 proteolytic turnover 2.5 X 3.0 X
At3g18260 --- Reticulon family protein ER 3.1 X 3.7 X
At1g77510 ATPDIL1-2 PDI-like 1-2 ER stress, UPR 1.2 X 2.0 X
At1g30600 Subtilase family protein cell wall 2.5 X 2.7 X
At2g44490 PEN2 Penetration 2, BGLU26 Beta Glucosidase 26 defense response, response to wounding 1.4 X 1.7 X
Corrected At5g40470 RNI-like superfamily protein response to wounding, mechanical stress X 2.1 −2.1 X
At1g44350 ILL6 ILL6 IAA-leucine resistant (ILR)-like gene 6 response to wounding, mechanical stress X 1.9 −2.0 X
At2g17430 MLO7 Seven transmembrane MLO family protein response to wounding, mechanical stress X 1.9 −1.7 X
At3g61060 AtPP2-A13 PP2-A13 phloem protein 2-A13 response to wounding, mechanical stress X 1.5 −2.1 X
At4g38550 phospholipase-like protein (PEARLI 4) family response to wounding, mechanical stress X 1.4 −1.3 X
At1g61340 FBS1 F-box stress induced 1 response to wounding, mechanical stress X 1.0 −1.8 X
At2g02400 NAD(P)-binding Rossmann-fold superfamily protein cell wall X 2.0 −1.6 X
At1g53840 ATPME1 PME1 pectin methylesterase 1 cell wall X 1.1 −1.4 X
At5g15350 ENODL17 early nodulin-like protein 17 cell wall X −1.7 1.0 X
At2g36830 GAMMA-TIP GAMMA-TIP gamma tonoplast intrinsic protein transmembrane transporter genes X 3.1 −3.5 X
At1g50400 porin family protein transmembrane transporter genes X 2.2 −2.0 X
At2g40090 ATATH9 ABC2 homolog 9 transmembrane transporter genes X 1.1 −1.0 X
At5g14570 ATNRT2.7 NRT2.7 high affinity nitrate transporter nitrate transporters genes X 2.4 −2.6 X
At4g40080 ENTH/ANTH/VHS superfamily protein nitrate transporters genes X 2.1 −2.3 X
At3g06850 DIN3 DIN3 dark inducible 3, BCE2 valine, leucine and isoleucine degradation X 1.2 −1.2 X
At2g14170 ALDH6B2 ALDH6B2 aldehyde dehydrogenase 6B2 valine, leucine and isoleucine degradation X 1.2 −1.1 X
At4g34030 MCCB MCCB 3-methylcrotonyl-CoA carboxylase valine, leucine and isoleucine degradation X 1.1 −1.1 X
HsfA2-Dependent WT genotypic adaptation At4g07960 ATCSLC12 Cellulose-synthase-like C12 cell wall 1.9 X X −2.0
At1g78980 SRF5 SRF5 STRUBBELIG-receptor family 5 plasma membrane receptor kinase −2.4 X X 2.2
At5g19070 --- SNARE associated Golgi protein family vesicle-mediated transport −2.6 X X 2.7
At2g43240 --- Nucleotide-sugar transporter family protein transport −1.3 X X 1.6
Compensated HSFA2 KO genotypic adaptation At2g32920 ATPDIL2-3 PDI-like 2-3 ER stress, UPR X 1.0 X 1.5
At1g17180 ATGSTU25 glutathione S-transferase TAU 25 UPR X 1.7 X 1.9
At3g15980 --- Coatomer, beta’ subunit vesicle-mediated transport X 1.7 X 1.7
At1g29060 --- Target SNARE coiled-coil domain protein vesicle-mediated transport X 1.3 X 1.5
At2g36300 --- Integral membrane Yip1 family protein vesicle-mediated transport X 1.0 X 1.2
At3g12180 --- Cornichon family protein intra-Golgi vesicle-mediated transport X −2.7 X −2.0
At5g66160 RMR1 receptor homology, transmembrane domain ring H2 intra-Golgi vesicle-mediated transport X −1.6 X −1.7
At3g21180 ACA9 autoinhibited Ca(2+)-ATPase 9 calcium pump X −2.7 X −2.6
At4g37640 ACA2 calcium ATPase 2 calcium pump X −2.2 X −1.7