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. 2019 Jan 20;20(2):437. doi: 10.3390/ijms20020437

Table 1.

Schematic representation of the shared domain architectures in O. sativa spp. japonica and indica. The numbering and domain organization for japonica is based on Rice Annotation Project Database (RAP-DB). * domain organization of the most representative combinations in the Galanthus nivalis agglutinin (GNA) family, see Supplementary Information, Table S3. ** includes also multiple repeat domain proteins. *** DUF (domain of unknown function) 3660 in spp. japonica, DUF 3404 in spp. indica.

Lectin and Domain Architecture Schematic Representation Spp. Japonica Spp. Indica
CRA graphic file with name ijms-20-00437-i001.jpg 2 3
EUL graphic file with name ijms-20-00437-i002.jpg 2 2
(EUL)2 graphic file with name ijms-20-00437-i003.jpg 3 3
Hevein graphic file with name ijms-20-00437-i004.jpg 1 1
(Hevein)4 graphic file with name ijms-20-00437-i005.jpg 1 1
Hevein/GH19 graphic file with name ijms-20-00437-i006.jpg 8 8
Nictaba graphic file with name ijms-20-00437-i007.jpg 4 5
F-box/Nictaba graphic file with name ijms-20-00437-i008.jpg 13 14
Fbox/(Nictaba)2 graphic file with name ijms-20-00437-i009.jpg 1 2
Protein kinase/Nictaba graphic file with name ijms-20-00437-i010.jpg 1 1
Jacalin graphic file with name ijms-20-00437-i011.jpg 16 21
(Jacalin)2 graphic file with name ijms-20-00437-i012.jpg 1 1
(Jacalin)3 graphic file with name ijms-20-00437-i013.jpg 1 1
Protein kinase/Jacalin graphic file with name ijms-20-00437-i014.jpg 1 0
Protein kinase/(Jacalin)2 graphic file with name ijms-20-00437-i015.jpg 1 0
Protein kinase/(Jacalin)3 graphic file with name ijms-20-00437-i016.jpg 2 1
Dirigent/Jacalin graphic file with name ijms-20-00437-i017.jpg 4 4
NB-ARC/Jacalin graphic file with name ijms-20-00437-i018.jpg 2 2
NB-ARC/(Jacalin)3 graphic file with name ijms-20-00437-i019.jpg 2 2
LysM graphic file with name ijms-20-00437-i020.jpg 8 8
(LysM)2 graphic file with name ijms-20-00437-i021.jpg 4 3
LysM/Protein kinase graphic file with name ijms-20-00437-i022.jpg 4 7
(LysM)2/Protein kinase graphic file with name ijms-20-00437-i023.jpg 1 1
Aspartate/glutamate/uridylate kinase/LysM graphic file with name ijms-20-00437-i024.jpg 2 2
Legume lectin graphic file with name ijms-20-00437-i025.jpg 14 12
(Legume lectin)2 graphic file with name ijms-20-00437-i026.jpg 1 0
Legume lectin/Protein kinase graphic file with name ijms-20-00437-i027.jpg 61 73
(Legume lectin)2/Protein kinase graphic file with name ijms-20-00437-i028.jpg 1 2
GNA graphic file with name ijms-20-00437-i029.jpg 2 11
GNA/(S-locus glycoprotein)1–2/(PAN)/(protein kinase)1–2/(SRK) * graphic file with name ijms-20-00437-i030.jpg 119 82 **
GNA/S-locus glycoprotein/PAN/DUF ***/protein kinase/(SRK) graphic file with name ijms-20-00437-i031.jpg 2 1
Legend
graphic file with name ijms-20-00437-i032.jpg CRA (PF00704) graphic file with name ijms-20-00437-i033.jpg GH19 (PF00182)
graphic file with name ijms-20-00437-i034.jpg EUL (PF14200) graphic file with name ijms-20-00437-i035.jpg F-box (PF00646)
graphic file with name ijms-20-00437-i036.jpg Hevein (PF00187) graphic file with name ijms-20-00437-i037.jpg Protein kinase domains (PF00069, PF50011, PF07714)
graphic file with name ijms-20-00437-i038.jpg Nictaba (PF14299) graphic file with name ijms-20-00437-i039.jpg Dirigent (PF03018)
graphic file with name ijms-20-00437-i040.jpg Jacalins (PF01419) graphic file with name ijms-20-00437-i041.jpg NB-ARC (PF00931)
graphic file with name ijms-20-00437-i042.jpg LysM (PF01476) graphic file with name ijms-20-00437-i043.jpg Aspartate/glutamate/uridylate kinase (PF00696)
graphic file with name ijms-20-00437-i044.jpg Legume lectin (PF00139) graphic file with name ijms-20-00437-i045.jpg S-locus glycoprotein (PF00954)
graphic file with name ijms-20-00437-i046.jpg GNA (PF01453) graphic file with name ijms-20-00437-i047.jpg PAN domains (PF00024, PF08276, PF14295)
graphic file with name ijms-20-00437-i048.jpg SRK (PF11883)
graphic file with name ijms-20-00437-i049.jpg DUF domains (PF12398, PF11884)