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. 2019 Jan 31;7:e6385. doi: 10.7717/peerj.6385

Table 1. The characteristics of primers of candidate reference genes for RT-qPCR of Camellia sinensis.

Gene symbol Accession number or Arabidopsis homolog locus Forward/reverse primer sequence (5′–3′) Amplicon length (bp) Melting temperature (°C) Efficiency value (%) R2
Cs18SrRNA AY563528.1 CGGCTACCACATCCAAGGAA/GCTGGAATTACCGCGGCT 191 63.2/63.5 95.6 0.994
CsGADPH KA295375.1 TTGGCATCGTTGAGGGTCT/CAGTGGGAACACGGAAAGC 206 61.6/61.7 100.3 1.000
CsACT KA280216.1 GCCATCTTTGATTGGAATGG/GGTGCCACAACCTTGATCTT 175 60.3/60.0 104.5 0.980
CsEF-1α KA280301.1 TTCCAAGGATGGGCAGAC/TGGGACGAAGGGGATTTT 196 59.6/60.2 99.2 0.999
CsUbi HM003234.1 GGAAGGACTTTGGCTGAC/GACCCATATCCCCAGAACAC 98 55.6/59.1 92.3 0.992
CsTUA DQ444294.1 TCCAAACTAACCTTGTGCCATAC/ACACCCTTGGGTACTACATCTCC 220 60.3/60.5 97.5 0.983
Cs26SrRNA AY283368 TCAAATTCCGAAGGTCTAAAG/CGGAAACGGCAAAAGTG 319 56.2/58.8 95.6 0.984
CsRuBP EF011075.1 AAGCACAATTGGGAAAAGAAG/AAAGTGAAAATGAAAAGCGACAAT 405 58.4/60.4 103.4 0.999
CsCYP AT3G56070 TTTGCGGATGAGAACTTCAA/CCATCTCCTTCACCACACTG 181 59.4/59.1 104.5 0.997
CselF-4α AT3G13920 TGAGAAGGTTATGCGAGCAC/GCAACATGTCAAACACACGA 149 59.0/59.1 109.0 0.989
CsMON1 AT2G28390 ATTTCCTTCGTGGAGAATGG/GCCCATAAACAAGCTCCAAT 160 59.0/59.0 92.1 0.986
CsPCS1 AT5G44070 AATGCCCTTGCTATTGATCC/CTCCAGAACAGTGAGCCAAA 151 59.0/59.0 98.9 0.981
CsSAND AT2G28390 GCCTGAACCGTCTTCTGTGGAGT/CTCAATCTCAGACACACTGGTGCTA 184 66.2/63.0 100.6 0.984
CsPP2A AT3G21650 AAGAAGAGGAACTGGCGACGGAAC/CAAACAGGTCCAGCAAACGCAAC 153 67.9/68 95.7 0.993
CsTBP AT1G55520 GGCGGATCAAGTGTTGGAAGGGAG/ACGCTTGGGATTGTATTCGGCATTA 166 68.0/68.1 97.6 0.987
CsLOX1 EU195885.2 AACAAGAACAACAATATATAGCTC/AAACGGAGCCTTCAACACC 165 51.8/60.1 101.1 0.994