Table 2.

The UL54 transcription regulatory sequences and factors in HSVs

HSV strain	Matrix identifier	Position strand	Core match	Matrix match	Sequence	Factor name
HSV-1 strain LXMW	V$OCT1_Q6	33(+)	1.000	0.956	gcatatGCAAAttgg	Oct-1
	V$OCT1_Q6	84(+)	1.000	0.978	tcatatGCAAAtgaa	Oct-1
	V$OCT_C	86(-)	1.000	0.991	atatGCAAAtgaa	OCT-X
	V$OCT1_Q6	90(+)	0.893	0.891	gcaaatGAAAAtcgg	Oct-1
	V$VMYB_01	166(-)	1.000	0.962	tcCCGTTacc	v-Myb
	V$OCT1_Q6	242(+)	0.883	0.909	tgatatGCTAAttaa	Oct-1
	V$PAX6_01	428(+)	1.000	0.822	cacggTCACGcttcggtgcct	Pax-6
HSV-1 strain 17	V$VMYB_01	26(+)	1.000	0.962	cgtAACGGca	v-Myb
	V$OCT1_Q6	33(+)	1.000	0.956	gcatatGCAAAttgg	Oct-1
	V$OCT1_Q6	84(+)	1.000	0.978	tcatatGCAAAtgaa	Oct-1
	V$OCT_C	86(+)	1.000	0.991	atatGCAAAtgaa	OCT-X
	V$OCT1_Q6	90(+)	0.893	0.891	gcaaatGAAAAtcgg	Oct-1
	V$VMYB_01	166(+)	1.000	0.962	tcCCGTTacc	v-Myb
	V$OCT1_Q6	239(+)	0.883	0.909	tgatatGCTAAttaa	Oct-1
	V$PAX6_01	425(+)	1.000	0.822	cacggTCACGcttcggtgcct	Pax-6
HSV-2	V$OCT1_Q6	39(+)	1.000	0.981	gcccatGCAAAttaa	Oct-1
	V$OCT1_Q6	91(+)	1.000	0.976	tcgcatGCAAAttaa	Oct-1
	V$OCT1_Q6	257(+)	0.883	0.908	ccgtatGCTAAttaa	Oct-1
	I$HAIRY_01	492(+)	1.000	0.973	ccgaCACGCgcccc	Hairy