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. 2018 Jul 13;35(3):478–486. doi: 10.1093/bioinformatics/bty566

Table 1.

Execution times on an Intel Core i7-4720HQ CPU @ 2.6 GHz.

SVD SPCa (c=)
SMSSVD
Dataset 4 16 64 10 iter. 100 iter.
TCGA 1.61s 7.4s 8.5s 9.2s 75s 396s
Breast Cancer 0.28s 1.7s 1.8s 2.5s 13s 49s
ALL (Microarray) 0.35s 2.4s 2.6s 3.2s 21s 77s
ALL (RNA-Seq) 0.08s 0.6s 0.5s 0.5s 9s 30s

Note: 7 dimensions were computed in all cases.

a

Our implementation of SPC.