Table 5. Characteristics of nine Asteraceae species.
Species | A. selengensis | A. capillaris | A. frigida | A. gmelinii | A. montana | C. boreale | S. sessilis | D. glutinosum | C. humilis |
---|---|---|---|---|---|---|---|---|---|
Length (bp)/GC content (%) | 151215/37.46 | 151056/37.46 | 151076/37.48 | 151318/37.42 | 151130/37.48 | 151012/37.47 | 150784/37.46 | 152229/37.33 | 152585/37.70 |
Size (bp)/GC content (%) of LSC | 82920/35.55 | 82821/35.56 | 82740/35.58 | 83061/35.49 | 82873/35.57 | 82817/35.56 | 82958/35.51 | 83954/35.32 | 83622/35.82 |
Size (bp)/GC content (%) of SSC | 18367/30.81 | 18309/30.72 | 18392/30.83 | 18335/30.83 | 18339/30.87 | 18281/30.85 | 18338/31.12 | 18233/31.11 | 18651/31.51 |
Size (bp)/GC content (%) of IR | 24964/43.09 | 24963/43.08 | 24972/43.06 | 24961/43.06 | 24959/43.08 | 24957/43.08 | 24744/43.10 | 25021/42.97 | 25156/43.13 |
Size (bp)/GC content (%) of CDS | 77928/37.84 | 79197/37.71 | 79182/37.77 | 79167/37.76 | 78912/37.77 | 76983/38.02 | 78372/37.75 | 78771/37.88 | 80257/38.03 |
Size (bp)/GC content (%) of introns | 17240/36.94 | 17244/36.92 | 17259/36.93 | 17303/36.85 | 17308/36.88 | 15524/37.74 | 16197/37.41 | 16479/37.18 | 16200/37.28 |
Size (bp)/GC content (%) of rRNA | 9048/55.08 | 9048/55.08 | 9048/55.08 | 9048/55.08 | 9048/55.08 | 9048/55.08 | 9047/55.18 | 9047/55.18 | 9046/55.23 |
Size (bp)/GC content (%) of tRNA | 2798/52.75 | 2798/52.72 | 2806/52.67 | 2798/52.75 | 2806/52.71 | 2723/52.63 | 2692/52.45 | 2694/52.86 | 2726/52.93 |
Size (bp)/GC content (%) of IGSs | 44274/32.43 | 42872/32.48 | 42854/32.44 | 43075/32.34 | 43129/32.50 | 46807/32.20 | 44549/32.49 | 45311/31.94 | 44446/32.77 |
No. of different genes | 114 | 114 | 114 | 114 | 114 | 113 | 111 | 111 | 114 |
No. of different protein-coding genes * | 80 | 80 | 80 | 80 | 80 | 80 | 79 | 79 | 81 |
No. of different rRNA genes | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 |
No. of different tRNA genes | 30 | 30 | 30 | 30 | 30 | 29 | 28 | 28 | 29 |
No. of different duplicated genes by IR | 18 | 19 | 20 | 19 | 19 | 18 | 19 | 19 | 21 |
No. of genes with introns ** | 21 | 21 | 21 | 21 | 21 | 19 | 20 | 20 | 20 |
* The presence of pseudogenes in the complete genome of A. frigida, A. montana, S. sessilis, D. glutinosum (ycf1, rps19), and C. humilis (ycf1, ycf68, rps19).
** Introns losses: one intron missing in rpl16 (C. boreale, S. sessilis and D. glutinosum).