Key resources table.
Reagent type (species) or resource |
Designation | Source or reference | Identifiers | Additional information |
---|---|---|---|---|
Cell line (H. sapiens) |
MCF10A | ATCC | ATCC:CRL10317 RRID: CVCL_0598 |
|
Cell line (H. sapiens) |
Neuro2A | ATCC | ATCC:CCL131 RRID: CVCL_0470 |
|
Transfected construct |
Synphilin-GFP | Zaarur et al., 2008 | n/a | Generated by Sherman lab - published Zaarur et al., 2008, backbone pCXsbr |
Transfected construct |
Human Alpha Synuclein | Addgene | 51437 | |
Transfected construct |
Dendra 2 | Clonetech USA | PDendra2C | |
Transfected construct |
Synphilin-Dendra2 | This Paper | n/a | Generated from synphilin-gfp and dendra two plasmid above. Available from Cisse lab |
Transfected construct |
alpha Synuclein Dendra2 |
This paper | n/a | Generated from human alpha Synuclein and Dendra two plasmid above. Available from Cisse lab |
Sequence- based reagent |
siGENOME Non-Targeting siRNA #5 |
Dharmacon | D-001210–05 | |
Sequence- based reagent |
siGENOME RUVBL1 siRNA |
Dharmacon | (D-008977–04) | |
Chemical compound, drug |
||||
Chemical compound, drug |
MG132 | Sigma Aldrich | M8699 | |
Chemical compound, drug |
Rapamycin | Sigma Aldrich | R8781 | |
Chemical compound, drug |
Cycloheximide | Sigma Aldrich | C7698 | |
Chemical compound, drug |
Azetidine-2-Carboxylic acid | Sigma Aldrich | A0760 | |
Chemical compound, drug | Cholera Toxin | Sigma Aldrich | C8052 | |
Chemical compound, drug |
Human Insulin | Sigma Aldrich | I9278 | |
Chemical compound, drug |
Leboqitz L15 medium | Sigma Aldrich | 11415064 | |
Chemical compound, drug |
Hydrocortisone | Sigma Aldrich | H0888 | |
Chemical compound, drug |
dbCAMP | Sigma Aldrich | D0627 | |
Chemical compound, drug |
Ver155008 | Sigma Aldrich | SML0271 | |
Chemical compound, drug |
Lipofectamine RNAiMAX | Thermo Fisher | 13778030 | |
Chemical compound, drug |
Xtremegene 9 | Sigma Aldrich | 6365779001 | |
Software, algorithm |
qSR | Andrews et al. (2018) | Software made available on repository - http://github.com/cisselab/qSR/ |
|
Software, algorithm |
Lattice Light sheet processing code | Chen et al., 2014 | ||
Software, algorithm |
Multiple Target tracking(MTT) |
Sergé et al., 2008 |