Table 3.
HLA SNPs and classic alleles identified in SSNS cohorts.
| SNP | Adeyemo et al. (26) | Jia et al. (28) | Debiec et al. (27) | Sekula et al. (80) | Dorval et al. (59) |
|---|---|---|---|---|---|
| HLA-DQA1 | |||||
| rs1129740 | X | X* | X* | – | X |
| rs1071630 | X | X* | X* | – | X |
| rs9272729 | – | – | – | X | – |
| HLA-DQB1 | |||||
| rs4642516 | – | X | – | – | – |
| rs3134996 | – | X | – | – | – |
| rs1063348 | – | – | X | – | – |
| HLA-DRB1 | |||||
| rs28366266 | – | – | X | – | – |
| HLA Alleles | Adeyemo et al. (26) | Jia et al. (28) | Debiec et al. (27) | Sekula et al. (80) | – |
| HLA-DQA1*0101 | X | – | – | – | – |
| HLA-DQA1*0201 | X | – | X | – | – |
| HLA-DQA1*0501 | – | – | – | X | – |
| HLA-DQB1*0201 | X | – | – | X | – |
| HLA-DQB1*0302 | – | X | – | – | – |
| HLA-DQB1*0602 | – | X | – | – | – |
| HLA-DQB1*0604 | – | X | – | – | – |
| HLA-DRB1*0202 | – | X | – | – | – |
| HLA-DRB1*0301 | – | – | – | X | – |
| HLA-DRB1*0701 | X | – | X | – | – |
| HLA-DRB1*0802 | – | X | – | – | – |
| HLA-DRB1*1302 | X | – | – | – | |
X, significant association;
*
SNP in LD.