Table 3.
Probability of similarity of FISH signal distribution between normal, cancer and NCBD tissue sections using manual and automatic processinga,b,c
| N1 | N2 | N3 | N4 | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 | C11 | C12 | C13 | C14 | B1 | B2 | B3 | B4 | B5 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Manual Analysis | |||||||||||||||||||||||
| N1 | 1 | 0.46 | 0.1 | 0.66 | 0 | 0 | 0.7 | 0 | 0 | 0 | 0 | 0 | 0 | 0.01 | 0 | 0.01 | 0 | 0.4 | 0.29 | 0.2 | 0.05 | 0.44 | 0.13 |
| N2 | * | 1 | 0 | 0.51 | 0 | 0 | 0.12 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.13 | 0.4 | 0.51 | 0.01 | 0.87 | 0.56 |
| N3 | * | * | 1 | 0.18 | 0 | 0 | 0.47 | 0 | 0 | 0 | 0 | 0 | 0 | 0.15 | 0 | 0.39 | 0.05 | 0.15 | 0 | 0.02 | 0.78 | 0.01 | 0 |
| N4 | * | * | * | 1 | 0 | 0 | 0.83 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.01 | 0 | 0.5 | 0.17 | 0.24 | 0.06 | 0.26 | 0.18 |
| Automatic Analysis | |||||||||||||||||||||||
| N1 | 1 | 0.41 | 0.67 | 0.12 | 0.00 | 0.00 | 0.81 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.96 | 0.00 | 0.02 | 0.17 | 0.43 | 0.64 | 0.49 | 0.30 |
| N2 | * | 1 | 0.12 | 0.20 | 0.00 | 0.01 | 0.41 | 0.01 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.40 | 0.00 | 0.03 | 0.25 | 0.80 | 0.12 | 0.55 | 0.96 |
| N3 | * | * | 1 | 0.06 | 0.00 | 0.00 | 0.92 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.78 | 0.00 | 0.00 | 0.02 | 0.13 | 0.22 | 0.12 | 0.11 |
| N4 | * | * | * | 1 | 0.04 | 0.10 | 0.29 | 0.10 | 0.00 | 0.00 | 0.00 | 0.01 | 0.00 | 0.00 | 0.08 | 0.34 | 0.01 | 0.00 | 0.01 | 0.21 | 0.19 | 0.04 | 0.16 |
a
Two samples were considered significantly different if the probability from the KS test was less than or equal to 1%.
b
Green cells denote cases where normal or NCBD samples were not similar to normal samples.
c
Red cells denote cases where cancer samples were similar to normal samples.
*
Means that the comparison value for example N2 vs N1 is the same as that for N1 vs N2.