Table 2.
T. bruceia | T. cruzicd | L. majorc | C. fasciculatac | B. saltansc | H. sapiensc | |||||
---|---|---|---|---|---|---|---|---|---|---|
Type | Gene IDb | Name | Gene IDb | Gene IDb | Gene IDb | Gene IDb | Name | Localisatione | Functionf | Reference |
I | Tb927.2.5160 Tbg972.2.3190 | J2 | TcCLB.511627.110 Tc_MARK_9726 TCDM_08977 | LmjF.27.2400 | CFAC1_210029700 | CUG85902 | DnaJA1 | CYT | Protein aggregation and refolding | Ludewig et al. 2015 |
Terada et al. 2005 | ||||||||||
Ahrendt and Braun 2010 | ||||||||||
Burger et al. 2014 | ||||||||||
Tb927.10.2290 Tbg972.10.2780 | J3 | TcCLB.511367.138 Tc_MARK_5591 TCDM_04677 | LmjF.21.0490 | CFAC1_260011100 | CUE68025 | – | CYT | Protein aggregation and refolding | Ashburner et al. 2000 | |
Tb927.9.8410 Tbg972.9.4590 | J27 | TcCLB.510243.30 Tc_MARK_5901 TCDM_05671 | LmjF.04.0940 | CFAC1_030019200 | CUE72942 | – | MITO | Protein aggregation and folding mtDNA maintenance | Acestor et al. 2009, 2011 | |
Panigrahi et al. 2009 | ||||||||||
Niemann et al. 2013 | ||||||||||
Tb927.11.16740 Tbg972.11.18880 | J45 | TcCLB.511531.9 Tc_MARK_2746 TCDM_02688 | LmjF.32.3300 | CFAC1_300054500 | CUG88240 | – | ER MITO | ERAD | Schlenstedt et al. 1995 | |
Panigrahi et al. 2009 | ||||||||||
Niemann et al. 2013 | ||||||||||
Tb927.3.1430 Tbg972.3.1180 | J46 | TcCLB.509437.40 Tc_MARK_5358 TCDM_10337 | LmjF.25.1100 | CFAC1_220020000 | CUG87582 | DnaJB11 | ER | Protein folding mRNA editing | Jin et al. 2009 | |
Tb927.9.12730 Tbg972.9.7790 | J50 | TcCLB.510743.100 Tc_MARK_4474 TCDM_00202 | LmjF.35.2980 | CFAC1_300079900 | CUG89607 | DnaJA3 | MITO | Protein aggregation and folding mtDNA maintenance | Týč et al. 2015 | |
Acestor et al. 2009 | ||||||||||
Niemann et al. 2013 | ||||||||||
II | Tb927.10.8540 Tbg972.10.10330 | J6 | TcCLB.506355.50 Tc_MARK_3436 TCDM_11062 | LmjF.36.6270 | CFAC1_280070900 | CUG94252 | DnaJB1 | CYT | Protein (re)folding | Freeman and Morimoto 1996 |
Tb927.11.15130 Tbg972.11.17000 | J7 | TcCLB.509157.80 Tc_MARK_2851 TCDM_10924 | LmjF.32.1940 | CFAC1_190031300 | CUG94211 | – | MITO FLAGELLAR | ? | Acestor et al. 2009 | |
Panigrahi et al. 2009 | ||||||||||
Niemann et al. 2013 | ||||||||||
Subota et al. 2014 | ||||||||||
III | Tb927.11.16980 Tbg972.11.19710 | J1 | TcCLB.511537.50 Tc_MARK_2772 TCDM_02646 | LmjF.32.3030 | CFAC1_300057600 | CUE71254 | – | CYT, NUC | Protein (re)folding | Louw et al. 2010b |
Tb927.10.5660 Tbg972.10.6880 | J5 | TcCLB.504163.100 Tc_MARK_8575 TCDM_01101 | LmjF.36.1330 | CFAC1_250022200 | CUG21319 | – | MITO | Protein folding Protein import-MITO | Panigrahi et al. 2009 | |
Niemann et al. 2013 | ||||||||||
Tb927.9.8410 Tbg972.9.4590 | J8 | TcCLB.510243.30 Tc_MARK_5901 TCDM_05671 | LmjF.04.0940 | CFAC1_210013600 | CUE72942 | DnaJC15? | MITO, GLYCO | Protein aggregation and folding mtDNA maintenance | Hatle et al. 2013 | |
Acestor et al. 2009 | ||||||||||
Niemann et al. 2013 | ||||||||||
Güther et al. 2014 | ||||||||||
Tb927.6.3850 Tbg972.6.3630 | J9 | TcCLB.511517.44 Tc_MARK_2007 TCDM_02176 | – | CFAC1_140009800 | ACI15980 | – | MITO | ? | Peikert et al. 2017 | |
Tb927.7.6660 Tbg972.7.760 | J10 | TcCLB.510055.140 Tc_MARK_7736 TCDM_09211 | LmjF.17.0460 | CFAC1_090011100 | CUG14142 | – | MITO | Acestor et al. 2009 | ||
Peikert et al. 2017 | ||||||||||
Tb927.9.8160 Tbg972.9.4440 | J11 | TcCLB.510241.70 Tc_MARK_5912 TCDM_05687 | LmjF.04.0780 | CFAC1_030017200 | CUG91719 | – | MITO | Acestor et al. 2009 | ||
Niemann et al. 2013 | ||||||||||
Tb927.4.2970 Tbg972. 4.2970 | J12 | TcCLB.506435.50 Tc_MARK_2622 TCDM_03557 | – | CFAC1_230048800 | CUG94092 | – | MITO | ? | – | |
Tb927.10.12530 Tbg972.10.12530 | J13 | TcCLB.509809.20 Tc_MARK_4997 | LmjF.18.1490 | CFAC1_140024700 | CUG91826 | DnaJC24? | CYT, NUC | Dipthamide synthesis | Liu et al. 2004 | |
Tb927.5.2880 Tbg972.5.4050 | J14 | TcCLB.507063.180 | LmjF.08.0990 | CFAC1_200014300 | CUG33795 | – | CYT, NUC | ? | – | |
Tb927.10.14730 Tbg972.10.17890 | J15 | TcCLB.503833.20 Tc_MARK_4789 TCDM_00497 | LmjF.19.0080 | CFAC1_170007200 | CUG02245 | – | CYT | ? | Nett et al. 2009 | |
Tb927.1.1960 Tbg972.1.1130 | J16 | TcCLB.506473.20 Tc_MARK_6047 TCDM_00922 | LmjF.20.1130 | CFAC1_180019100 | CUI12704 | DnaJC2 | CYT | Translation | Otto et al. 2005 | |
Nett et al. 2009 | ||||||||||
Tb927.1.4300 Tbg972.1.2850 | J17 | TcCLB.506529.260 Tc_MARK_5675 TCDM_05005 | LmjF.12.1110 | CFAC1_010014800 | CUG89438 | – | CYT, NUC | ? | – | |
Tb927.11.1010 Tbg972.11.1070 | J18 | TcCLB.506925.470 Tc_MARK_6358 TCDM_01954 | LmjF.27.0410 | CFAC1_230048800 | CUG94092 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Acestor et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.4.650 Tbg972.4.400 | J19 | TcCLB.507053.120 Tc_MARK_2469 | LmjF.34.4080 | CFAC1_290072000 | CUI15604 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.10.5040 Tbg972.10.6100 | J20 | TcCLB.510293.50 Tc_MARK_8503 TCDM_01182 | LmjF.36.0610 | CFAC1_250013400 | CUG62628 | – | MEM | Protein import | Ashburner et al. 2000 | |
Tb927.7.540 Tbg972.7.420 | J21 | TcCLB.506287.90 Tc_MARK_965 TCDM_8503 | LmjF.26.1410 | CFAC1_290023200 | CUI15434 | – | MITO, GLYCO | Protein import | Panigrahi et al. 2009 | |
Güther et al. 2014 | ||||||||||
Peikert et al. 2017 | ||||||||||
Niemann et al. 2013 | ||||||||||
Tb927.10.6610 Tbg972.10.8080 | J22 | TcCLB.510187.330 Tc_MARK_3742 TCDM_06560 | LmjF.36.2110 | CFAC1_250032000 | CUG93498 | – | MITO, GLYCO | ? | Niemann et al. 2013 | |
Zíková et al. 2017 | ||||||||||
Güther et al. 2014 | ||||||||||
Tb927.10.13830 Tbg972.10.17000 | J23 | TcCLB.507993.30 Tc_MARK_4871 | LmjF.18.0330 | CFAC1_140009800 | ACI15980 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Acestor et al. 2009 | ||||||||||
Niemann et al. 2013 | ||||||||||
Tb927.6.3120 Tbg972.6.2910 | J24 | TcCLB.511751.60 Tc_MARK_1932 | LmjF.30.1790 | CFAC1_260039300 | CUG86810 | – | CYT, NUC | ? | – | |
Tb927.7.680 Tbg972.7.590 | J25 | TcCLB.506289.74 Tc_MARK_979 TCDM_07562 | LmjF.26.1270 | CFAC1_290021600 | CUG93121 | – | MITO | ? | Panigrahi et al. 2009 | |
Niemann et al. 2013 | ||||||||||
Tb927.7.6200 Tbg972.7.7170 | J26 | TcCLB.506513.30 Tc_MARK_7763 | LmjF.17.0040 | CFAC1_090006000 | CUG74938 | – | MITO, GLYCO | Protein import-MITO | Ashburner et al. 2000 | |
Acestor et al. 2009 | ||||||||||
Güther et al. 2014 | ||||||||||
Niemann et al. 2013 | ||||||||||
Tb927.7.740 Tbg972.7.670 | J28 | TcCLB.506135.40 TCDM_01252 | LmjF.26.1200 | CFAC1_290020200 | CUG93098 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.11.5710 Tbg972.11.6430 | J29 | TcCLB.506203.50 Tc_MARK_311 TCDM_00777 | LmjF.24.1080 | CFAC1_210020200 | CUF82364 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Tb927.8.1010 Tbg972.8.590 | J30 | TcCLB.508569.120 Tc_MARK_8237 TCDM_01742 | LmjF.07.0780 | CFAC1_080017400 | CUI14395 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.3.2290 Tbg972.3.2270 | J32 | TcCLB.508479.280 Tc_MARK_5111 TCDM_08321 | LmjF.25.2190 | CFAC1_230010600 | CUG43629 | – | ER | ? | Field et al. 2010 | |
Tb927.10.9840 Tbg972.10.12010 | J33 | TcCLB.504147.60 Tc_MARK_2256 TCDM_02891 | LmjF.36.4470 | CFAC1_280050000 | CUG72683 | – | CYT | ? | – | |
Tb927.9.10010 Tbg972.9.5780 | J34 | TcCLB.506887.90 Tc_MARK_4329 TCDM_00009 | LmjF.35.4630 | CFAC1_300097800 | CUG92668 | – | ER, MITO | Goldshmidt et al. 2008 | ||
Acestor et al. 2009 | ||||||||||
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Niemann et al. 2013 | ||||||||||
Tb927.7.4590 Tbg972.7.5200 | J35 | TcCLB.506605.150 Tc_MARK_7879 TCDM_05890 | LmjF.14.0110 | CFAC1_110006300 | CUF84499 | – | MITO | ? | Panigrahi et al. 2009 | |
Tb927.3.1760 Tbg972.3.1610 | J36 | TcCLB.510091.50 Tc_MARK_5057 TCDM_03945 | LmjF.25.1690 | CFAC1_230016200 | – | DnaJC20 | MITO | FeS cluster biogenesis | Mokranjac et al. 2003 | |
Uhrigshardt et al. 2010 | ||||||||||
Acestor et al. 2009 | ||||||||||
Tb927.10.12640 Tbg972.10.15230 | J37 | TcCLB.503455.10 Tc_MARK_4988 Tc_MARK_4989 TCDM_05256 | LmjF.18.1430 | – | CUG91818 | – | CYT, NUC | ? | – | |
Tb927.6.3730 Tbg972.6.3500 | J38 | TcCLB.506941.270 | LmjF.30.2450 | CFAC1_140023800 | CUF23573 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.9.14180 Tbg972.9.8890 | J39 | TcCLB.510759.134 Tc_MARK_4558 TCDM_03405 | – | CFAC1_250032000 | – | – | MITO | ? | Niemann et al. 2013 | |
Tb927.8.4470 Tbg972.8.4230 | J40 | TcCLB.508989.60 | LmjF.10.1050 | CFAC1_040019100 | CUG90885 | – | MITO | ? | Peikert et al. 2017 | |
Tb927.4.3980 Tbg972.4.4110 | J41 | – | – | CFAC1_270012300 | CUG89969 | – | CYT, GOLGI | Intracellular trafficking | Ashburner et al. 2000 | |
Tb927.10.12380 Tbg972.10.14920 | J42 | TcCLB.507625.110 Tc_MARK_5009 TCDM_09879 | LmjF.18.1650 | CFAC1_140028800 | – | – | CYT | Protein folding | Ashburner et al. 2000 | |
Tb927.9.10950 Tbg972.9.6470 | J43 | TcCLB.508461.240 Tc_MARK_4379 TCDM_00080 | LmjF.35.4040 | CFAC1_300054500 | – | – | CYT | ? | – | |
Tb927.8.7010 Tbg972.8.7230 | J44 | TcCLB.509911.100 Tc_MARK_1523 | LmjF.31.3100 | CFAC1_270068300 | CUE89851 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.8.1030 Tbg972.8.610 | J48 | TcCLB.508569.140 Tc_MARK_8239 TCDM_01739 | LmjF.31.3100 | – | – | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.6.2480 Tbg972.8.2240 | J49 | TcCLB.509965.229 TCDM_01497 | LmjF.30.1030 | CFAC1_260030200 | CUG89958 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Panigrahi et al. 2009 | ||||||||||
Peikert et al. 2017 | ||||||||||
Tb927.4.2220 Tbg972.4.2160 | J51 | TcCLB.506559.430 Tc_MARK_452 TCDM_04700 | LmjF.34.2430 | CFAC1_290053200 | CUG93032 | – | CYT | Protein folding | Ashburner et al. 2000 | |
Tb927. 10.4900 Tbg972.10.5950 | J52 | TcCLB.504203.60 Tc_MARK_8493 TCDM_01195 | LmjF.36.0500 | CFAC1_250012000 | CUG91204 | DnaJC7 | CYT | Protein folding quality control | Brychzy et al. 2003 | |
Tb927.7.3630 Tbg972.7.4040 | J53 | TcCLB.510407.80 Tc_MARK_8808 TCDM_06728 | LmjF.14.1330 | CFAC1_110026000 | CUG92395 | DnaJC3 | ER, MITO, GLYCO | ER protein synthesis | Yan et al. 2002 | |
Goodman et al. 2011 | ||||||||||
Güther et al. 2014 | ||||||||||
Tb927.11.8420 Tbg972.11.9590 | J55 | TcCLB.506931.30 | LmjF.28.1270 | CFAC1_300022100 | CUF97845 | – | SEC | ? | – | |
Tb927.2.3960 Tbg972.2.2180 | J56 | TcCLB.511109.90 Tc_MARK_9638 TCDM_14441 | LmjF.33.2690 | CFAC1_210037700 | – | DnaJB3? | NUC | Protein folding | Ashburner et al. 2000 | |
Tb927.11.5920 Tbg972.11.6680 | J58 | TcCLB.508515.120 Tc_MARK_6411 TCDM_00738 | LmjF.24.1300 | CFAC1_210023600 | CUG89365 | DnaJC14 | ER, MITO, CYT | Cell surface export | Jung et al. 2016 | |
Tb927.6.3500 Tbg972.6.3250 | J59 | TcCLB.506941.9 Tc_MARK_ 1973 TCDM_06339 TCDM_06340 | LmjF.30.2210 | CFAC1_260045500 | CUF24956 | DnaJC13 | CYT | Endosome trafficking | Girard et al. 2005 | |
Girard and McPherson 2008 | ||||||||||
Tb927.11.13600 Tbg972.11.15180 | J60 | TcCLB.506753.160 Tc_MARK_5565 TCDM_05717 | LmjF.08.0650 | CFAC1_050025800 | CUG87832 | – | MITO | ? | Panigrahi et al. 2009 | |
Tb927.10.2460 Tbg972.10.3050 | J62 | TcCLB.412943.9 Tc_MARK_3379 TCDM_04012 TCDM_04013 | LmjF.34.0040 | CFAC1_290027800 | CUF08277 | – | MEM | Protein import | Ashburner et al. 2000 | |
Tb927.11.13830 Tbg972.11.15450 | J63 | TcCLB.509161.110 Tc_MARK_2986 TCDM_09129 | LmjF.32.0590 | CFAC1_190012200 | CUI15501 | – | MITO | Acestor et al. 2009 | ||
Tb927.4.880 Tbg972.4.680 | J65 | TcCLB.508257.160 Tc_MARK_2488 TCDM_02481 | LmjF.34.3870 | CFAC1_290069300 | CUI15574 | – | MITO | Protein folding | Ashburner et al. 2000 | |
Tb927.10.5180 Tbg972.10.6290 | J67 | TcCLB.510297.30 TCDM_01165 | LmjF.36.0760 | CFAC1_250015000 | CUG94364 | – | MITO | Protein folding | Ashburner et al. 2000 | |
Tb927.11.10950 Tbg972.11.12260 | J69 | TcCLB.509823.10 Tc_MARK_7219 TCDM_09821 | LmjF.36.4970 | CFAC1_280056000 | CUG89391 | – | MITO | ? | Panigrahi et al. 2009 | |
Tb927. 8.8310 Tbg972. 8.8650 | J70 | – | – | – | – | – | GLYCO | ? | – | |
Tb927. 9.12530 Tbg972.9.7690 | J71 | TcCLB.510741.190 Tc_MARK_4463 TCDM_00188 | LmjF.35.3090 | CFAC1_300081200 | CUG89593 | – | MITO | Protein import-MITO | Ashburner et al. 2000 | |
Tb927.11.9060 Tbg972.11.10120 | J72 | TcCLB.507077.30 Tc_MARK_1361 TCDM_07079 | – | – | – | – | CYT | ? | – | |
Tb927.9.1560 Tbg972.9.280 | J73 | TcCLB.510347.50 Tc_MARK_2404 TCDM_08512 | LmjF.26.2520 | CFAC1_160029000 | CUG90840 | – | NUC | Goos et al. 2017 | ||
IV | Tb927.7.990 Tbg972.7.940 | J31 | TcCLB.506729.50 Tc_MARK_1042 TCDM_01293 | LmjF.26.0940 | CFAC1_290017000 | – | – | MITO | ? | Acestor et al. 2009 |
Panigrahi et al. 2009 | ||||||||||
Niemann et al. 2013 | ||||||||||
Tb927.1.1230 Tbg972.1.570 | J47 | TcCLB.511423.170 Tc_MARK_6003 TCDM_01017 | LmjF.20.0550 | CFAC1_180012900 | CUG67522 | – | MITO | Protein folding | Panigrahi et al. 2009 | |
Tb927.8.6310 Tbg972.8.6370 | J68 | TcCLB.503885.70 | LmjF.24.1910 | CFAC1_250049500 | CUG31915 | DnaJC19 | MITO | Protein import-MITO | Ashburner et al. 2000 |
CYT cytosol, MITO mitochondria, NUC nucleus, ER endoplasmic reticulum, MEM plasma membrane/membrane bound, GOLGI Golgi apparatus, GYLCO glycosomes, SEC secreted
aThe nomenclature for the J-proteins of T. b. brucei and T. b. gambiense were derived from Folgueira and Requena (2007)
bGene IDs for the J-proteins from T. b. brucei, T. b. gambiense, T. cruzi, L. major and C. fasciculata were obtained from TriTrypDB database (http://tritrypdb.org/tritrypdb/; Aslett et al. 2010). The gene IDs for the J-proteins from B. saltans were retrieved from NCBI (https://www.ncbi.nlm.nih.gov/)
cOrthologues identified from T. cruzi, L. major, C. fasciculata, and Homo sapiens were determined by reciprocal BLASTP analysis
dThe gene IDs for orthologues identified in three strains of T. cruzi are listed. T. cruzi CL Brener Esmeraldo-like (TcCLB), T. cruzi Dm28c (TCDM), and T. cruzi marinkelli strain B7 (Tc_MARK)
eSubcellular localizations for the T. b. brucei and T. b. gambiense J-proteins were either predicted using the online prediction servers and/or determined using various proteomic datasets listed in the materials and methods
fThe predicted cellular role and functions for each J-protein from T. brucei were implied from either Gene Ontology (Ashburner et al. 2000), or published literature on the identified functions/cellular roles of their identified orthologues