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. 2019 Feb 5;93(4):e01786-18. doi: 10.1128/JVI.01786-18

TABLE 5.

Primers related to vRNA sequence determination

Target Primer name Sequence (5′→3′) Sequencing primer
3′ end of segment 5 3′ Seq S5 2bp for GAAAAATACCCTTGTTTCTACTAG
3′ Seq S5 rev AGTTCTCTCATCCACTTTCCGT x
3′ end of segment 7 3′ Seq S7 2bp for GTAAAAAACTACCTTGTTTCTACTAG
3′ Seq S7 rev TATGAGACCGATGCTGGGAG x
3′ end of segment 7 (OP7 virus) 3′ Seq S7-OP7 2bp for GTAAAAAACTACCTTGTTTCTACTAG
3′ Seq S7-OP7 rev GTCACAGTCCCCATCCTGTT x
3′ end of segment 8 3′ Seq S8 2bp for AAAAACACCCTTGTTTCTACTAG
3′ Seq S8 rev TTTATCCATGATCGCCTGGT x
5′ end of segment 5 5′ Seq S5 for ACCAATCAACAGAGGGCATC x
5′ Seq S5 2bp rev TGATTATCTACCCTGCTTTCGCTAG
5′ end of segment 7 5′ Seq S7 for TAGCTCCAGTGCTGGTCTGA x
5′ Seq S7 2bp rev TTTCAATATCTACCTGCTTTCGCTAG
5′ end of segment 7 (OP7 virus) 5′ Seq S7-OP7 for TCCAGTGCTGGTCTGAAAGA x
5′ Seq S7-OP7 2bp rev TCAACATCTACCTGCTTTCACTAG
5′ end of segment 8 5′ Seq S8 for TCACCATTGCCTTCTCTTCC x
5′ Seq S8 2bp rev TGTCACCCTGCTTTCGCTAG