. 2019 Feb 6;51:4. doi: 10.1186/s12711-018-0444-4

Table 4.

Significant SNPs according to Bonferroni correction for direct genetic effects on body weight recorded at different ages

SNP	Chr	Position	Ref allele	Effect	BW0		BW23		BW1314
SNP	Chr	Position	Ref allele	Effect	Phen	dDRP	Phen	dDRP	Phen	dDRP
INRA-658	3	29627982	A	−						X^c
BTB-01695573	4	10794285	C	+	X^b	X^b
ARS-BFGL-NGS-3933	5	105695909	G	−		X^a
Hapmap47397-BTA-74925	5	105744830	A	−	X^ab	X^ab				X^ac
Hapmap60480-ss46526970	5	105870613	C	−	X^ab	X^ab		X^ac	X^ac	X^ac
ARS-BFGL-NGS-39379	5	106269362	G	−	X^ab	X^ab			X^c	X^ac
ARS-BFGL-NGS-10732	5	106780606	G	−					X^ac	X^ac
Hapmap57466-rs29018274	5	107362671	A	+		X^a		X^a		X^a
ARS-BFGL-NGS-5139	7	92474466	A	+		X^b
ARS-BFGL-NGS-107035	7	93007435	A	+	X^b	X^ab
ARS-BFGL-NGS-109285	18	57589121	A	+		X^b			X^ac	X^ac
ARS-BFGL-NGS-109317	29	49906123	A	+	X^b
ARS-BFGL-NGS-40378	29	50296573	A	+	X^b	X^b

BW0: body weight recorded at birth; BW23: body weight recorded at 2 to 3 month of age; BW1314: body weight recorded at 13 to 14 months of age

The indicated significant SNPs are from runs that consider the following similarity matrices: ^athe genomic relationship matrix $G$ , ^bLOCO + CHR_PC20 and ^cLOCO + CHR_PC10