Table 2.

Non-synonymous SNPs associated with fiber length

Gene	Position	Ref	Ref aa	REF, n	Ref, mm	Alt	Alt aa	ALT, n	Alt, mm	P-value
Gh_A07G1744	71,156,748	G	V	460	28.4	A	M	99	28.9	1.4E-05
Gh_A07G1769	72,203,768	T	K	475	28.4	C	E	84	29.0	3.4E-06
Gh_A07G1793	72,731,159	A	E	427	28.3	T	D	132	28.8	7.1E-05
Gh_A08G1774	97,828,015	A	K	451	28.6	T	M	108	28.0	4.0E-06
Gh_A08G1775	97,852,975	C	R	446	28.6	G	G	113	28.0	4.6E-07
Gh_A11G0352	3,230,793	T	N	437	28.6	A	Y	122	28.0	2.6E-07
Gh_D02G0366	4,864,217	G	A	487	28.4	C	G	72	28.9	2.9E-04
Gh_D05G0610	4,932,816	T	R	362	28.7	C	K	198	28.1	6.8E-08
Gh_D11G1928	24,009,361	G	R	495	28.5	A	C	63	27.8	5.3E-06
Gh_D11G1929	24,030,087	G	E	505	28.5	T	D	54	27.8	1.2E-05
Gh_D11G1931	24,065,685	A	K	499	28.5	G	R	60	27.8	1.0E-06
Gh_D12G0592	11,043,241	T	V	514	28.5	C	I	45	27.7	1.3E-05

Column names of the table represent reference (Ref) to NBI G. hirsutum TM-1 genome and alternative (Alt) SNP and amino acid (aa); number (n) of RILs with Ref or Alt SNPs; average length in mm RILs carrying Ref or Alt SNPs. P-values were determined by two-tailed t-test