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. 2019 Feb 7;20:120. doi: 10.1186/s12864-018-5399-x

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Relationships between strains of T. inflatum. a A SNP phylogeny used to assess relationships between strains showed two major groups supported by strong bootstrap support. Group 1 was comprised of 714.70, 31671, and 31975, while group 2 was comprised of 567.84, 824.70, and 8044. b A cladogram and heatmap showing relationships based on pairwise inversion distances between strains was also created and mostly supported the two groupings observed from SNP data, with the exception that 8044 came out as sister to all other clades rather than as part of group2. Strain 8044 was most diverged in terms of genome rearrangements from all other strains