. 2019 Feb 8;9:1677. doi: 10.1038/s41598-019-39149-7

Table 1.

Sampling depth, richness and alpha diversity indices for haemolymph sequence libraries of juvenile P. ornatus.

Sample ID	Lobster no.	Sampling depth									Richness estimators		Diversity indices
Sample ID	Lobster no.	Raw sequences	Filtered sequences	Obs. OTUs	Good’s coverage (%)	Phylum	Class	Order	Family	Genus	Chao1	ACE	Shannon	Simpson
28 °C day 0
Culture-independent samples
28C0d1	1	7,532	4,354	109	97.5	6	11	19	18	21	144	145	2.54	0.81
28C0d2	2	4,790	2,660	119	95.5	7	10	16	16	15	130	136	3.71	0.96
28C0d3	3	4,248	2,389	160	93.3	6	12	16	14	18	177	181	4.39	0.98
28C0d4	4	9,229	6,979	230	96.7	8	13	25	30	32	320	280	4.19	0.95
28C0d5	5	9,689	6,978	274	96.1	11	19	32	35	39	344	367	4.33	0.96
28C0d6	6	4,972	3,755	237	93.7	13	19	31	30	34	281	318	4.26	0.97
28 °C day 6
Culture-independent samples
28C6d1	1	5,132	3,745	172	95.4	7	11	22	24	21	198	204	3.76	0.93
28C6d2	2	8,588	6,261	137	97.8	5	9	13	14	16	154	158	4.16	0.98
28C6d3	3	8,911	5,439	158	97.1	6	9	15	16	11	206	197	4.11	0.97
28C6d4	4	4,264	3,149	156	95.0	8	10	20	21	27	176	179	4.15	0.97
28C6d5	5	4,869	2,325	145	93.8	9	12	16	22	29	161	158	4.08	0.97
28C6d6	6	9,043	6,169	108	98.2	4	7	13	15	19	145	138	3.61	0.95
Culture-dependent samples
28C6d128^a	1–6	12,306	10,051	140	98.6	2	3	6	4	11	155	159	2.56	0.85
34 °C day 6
Culture-independent samples
34C6d1	1	3,810	2,678	108	96.0	3	6	11	13	18	121	128	3.62	0.96
34C6d2	2	10,382	8,576	156	98.2	5	11	20	16	26	225	193	3.92	0.96
34C6d3	3	10,046	5,464	77	98.6	5	9	15	18	21	104	107	1.73	0.61
34C6d4	4	9,007	5,516	112	98.0	5	9	13	14	7	144	136	3.71	0.95
34C6d5	5	8,872	5,524	112	98.0	6	9	12	11	10	132	137	3.58	0.95
34C6d6	6	5,092	3,107	133	95.7	7	11	20	22	23	151	151	3.84	0.96
Culture-dependent samples
34C6d178^a	1–6	12,012	9,064	197	97.8	2	4	6	7	14	203	205	3.66	0.94

^aPool of all colonies cultured on marine agar.