Table 1.
Strain Information
| Isolate | Isolation Country | Isolation Region | FQR Lineage | Reference |
|---|---|---|---|---|
| 07-00080 | Germany | Stuttgart | FQR2 | Steglich et al [10] |
| 08-00070 | Germany | Landau/Pfalz | FQR2 | Steglich et al [10] |
| 09-00022 | Germany | Bad Langensalza | FQR2 | Steglich et al [10] |
| 09-00077 | Germany | Sindelfingen | FQR2 | Steglich et al [10] |
| 10-00484 | Germany | Leipzig | FQR1 | Steglich et al [10] |
| 12-00001 | Germany | Homburg | FQR2 | Steglich et al [10] |
| 12-00004 | Germany | Bielefeld | FQR2 | Steglich et al [10] |
| 12-00014 | Germany | Leipzig | FQR1 | Steglich et al [10] |
| 12-00017 | Germany | Bad Berka | FQR1 | Steglich et al [10] |
| 12-00018 | Germany | Radebeul | FQR1 | Steglich et al [10] |
| 12-00019 | Germany | Zittau | FQR1 | Steglich et al [10] |
| Aus001 | Australia | Melbourne | FQR2 | He et al [5] |
| Aus005 | Australia | Melbourne | FQR2 | He et al [5] |
| Bir002 | United Kingdom | Birmingham | FQR2 | He et al [5] |
| BMC-18 | United States | Texas | FQR1 | From this study |
| Can010 | Canada | Montreal | FQR2 | He et al [5] |
| Exe014 | United Kingdom | Exeter | FQR2 | He et al [5] |
| Exe015 | United Kingdom | Exeter | FQR2 | He et al [5] |
| FCH-1 | United States | Texas | FQR2 | Endres et al [9] |
| FCH-2 | United States | Texas | FQR2 | Endres et al [9] |
| FCH-4 | United States | Texas | FQR2 | Endres et al [9] |
| Ham005 | United Kingdom | London | FQR2 | He et al [5] |
| Kor002 | Korea | Korea | FQR1 | He et al [5] |
| Kor003 | Korea | Korea | FQR1 | He et al [5] |
| Kor004 | Korea | Korea | FQR1 | He et al [5] |
| Kor005 | Korea | Korea | FQR1 | He et al [5] |
| LSTM002 | United States | Pennsylvania | FQR1 | He et al [5] |
| LSTM005 | United States | Arizona | FQR1 | He et al [5] |
| LSTM006 | United States | Arizona | FQR1 | He et al [5] |
| LSTM022 | United States | Oregon | FQR1 | He et al [5] |
| LSTM025 | United Kingdom | Dundee | FQR2 | He et al [5] |
| LTC10 | United States | Texas | FQR2 | Endres et al [9] |
| LTC-14 | United States | Texas | FQR2 | Endres et al [9] |
| LTC15 | United States | Texas | FQR2 | Endres et al [9] |
| LTC15A | United States | Texas | FQR2 | Endres et al [9] |
| LTC15B | United States | Texas | FQR2 | Endres et al [9] |
| LTC19 | United States | Texas | FQR2 | Endres et al [9] |
| LTC-36 | United States | Texas | FQR2 | Endres et al [9] |
| LTC39 | United States | Texas | FQR2 | Endres et al [9] |
| LTC39A | United States | Texas | FQR2 | Endres et al [9] |
| LTC44 | United States | Texas | FQR2 | Endres et al [9] |
| LTC5A | United States | Texas | FQR2 | Endres et al [9] |
| LTC7B | United States | Texas | FQR2 | Endres et al [9] |
| MCD-116 | United States | Texas | FQR1 | From this study |
| MCD-173 | United States | Texas | FQR1 | From this study |
| MCD-60 | United States | Texas | FQR1 | From this study |
| MDA133 | United States | Texas | FQR2 | From this study |
| MHS-301 | United States | Texas | FQR2 | From this study |
| MHS-322 | United States | Texas | Pre-epidemic | From this study |
| MHS-479 | United States | Texas | FQR2 | From this study |
| MHS-480 | United States | Texas | FQR2 | From this study |
| MHS490 | United States | Texas | Pre-epidemic | From this study |
| MT1039 | United States | Texas | FQR1 | From this study |
| MT1300 | United States | Texas | FQR2 | From this study |
| MT1344 | United States | Texas | FQR2 | From this study |
| MT1349 | United States | Texas | FQR1 | From this study |
| MT1410 | United States | Texas | FQR2 | From this study |
| MT1433 | United States | Texas | FQR2 | From this study |
| MT1443 | United States | Texas | FQR2 | From this study |
| MT1453 | United States | Texas | FQR2 | From this study |
| MT1470 | United States | Texas | FQR2 | From this study |
| MT1641 | United States | Texas | FQR2 | From this study |
| MT1753 | United States | Texas | FQR1 | From this study |
| MT1821 | United States | Texas | FQR1 | From this study |
| MT188 | United States | Texas | FQR1 | From this study |
| MT189 | United States | Texas | FQR2 | From this study |
| MT201 | United States | Texas | FQR1 | From this study |
| MT2040 | United States | Texas | FQR1 | From this study |
| MT207 | United States | Texas | FQR1 | From this study |
| MT2252 | United States | Texas | FQR1 | From this study |
| MT2626 | United States | Texas | FQR1 | From this study |
| MT2710 | United States | Texas | FQR1 | From this study |
| MT2715 | United States | Texas | FQR2 | From this study |
| MT2780 | United States | Texas | FQR1 | From this study |
| MT2795 | United States | Texas | FQR2 | From this study |
| MT3133 | United States | Texas | FQR1 | From this study |
| MT3227 | United States | Texas | FQR2 | From this study |
| MT3678 | United States | Texas | FQR1 | From this study |
| MT443 | United States | Texas | FQR1 | From this study |
| MT-4447 | United States | Texas | FQR1 | From this study |
| MT-5025 | United States | Texas | FQR1 | From this study |
| MT-5051 | United States | Texas | FQR2 | From this study |
| MT-5055 | United States | Texas | FQR1 | From this study |
| MT-5064 | United States | Texas | FQR1 | From this study |
| MT5314 | United States | Texas | FQR1 | From this study |
| MT5337 | United States | Texas | FQR1 | From this study |
| MT5342 | United States | Texas | FQR2 | From this study |
| MT5370 | United States | Texas | FQR1 | From this study |
| MT785 | United States | Texas | FQR1 | From this study |
| P23 | United States | Pennsylvania | FQR2 | He et al [5] |
| P31 | United States | Pennsylvania | FQR2 | He et al [5] |
| P45 | United States | Pennsylvania | FQR2 | He et al [5] |
| R20291 | United Kingdom | Stoke Mandeville | FQR2 | He et al [5] |
| SH1171 | United States | Texas | FQR1 | From this study |
| SH515 | United States | Texas | FQR1 | From this study |
| SH541 | United States | Texas | FQR2 | From this study |
| SH-769 | United States | Texas | FQR1 | From this study |
| SH-797 | United States | Texas | FQR2 | From this study |
| SH-804 | United States | Texas | FQR1 | From this study |
| VM-2-S41 | United States | Texas | FQR1 | From this study |
| VM-2-S60 | United States | Texas | FQR1 | From this study |
| VM-5-S43 | United States | Texas | FQR1 | From this study |
| VM-5-S59 | United States | Texas | FQR1 | From this study |
| VM-8-S42 | United States | Texas | FQR1 | From this study |
| VM-8-S58 | United States | Texas | FQR1 | From this study |
| WH-28 | United States | Texas | FQR1 | From this study |
| WH-29 | United States | Texas | FQR2 | From this study |
| ZKS-32 | United States | Kansas | FQR1 | From this study |