A de novo shape-motif discovery algorithm reveals preferences of transcription factors for DNA shape beyond sequence-motifs

. Author manuscript; available in PMC: 2020 Jan 23.

Published in final edited form as: Cell Syst. 2019 Jan 16;8(1):27–42.e6. doi: 10.1016/j.cels.2018.12.001

		ChIP-peak as control
		Found motif	Not found motif
Flanking non-ChIP regions as control	Found motif	261	50
Flanking non-ChIP regions as control	Not found motif	93	108