Table 3.
Single-nucleotide polymorphism allele frequencies and associations for 12 SNPs between cases and controls.
| SNP | CHR | BP | MA | MAF case | MAF control | P values | OR (95% CI) |
|---|---|---|---|---|---|---|---|
| rs1676486 | 1 | 103354138 | A | 0.32 | 0.19 | 0.026 | 2.089 (1.092–3.996) |
| rs3753841 | 1 | 103379918 | G | 0.39 | 0.26 | 0.036 | 1.886 (1.038–3.426) |
| rs12138977 | 1 | 103393457 | C | 0.31 | 0.18 | 0.024 | 2.133 (1.104–4.123) |
| rs2126642 | 1 | 103405793 | A | 0.11 | 0.10 | 0.818 | 1.112 (0.450–2.746) |
| rs2622848 | 1 | 103421003 | C | 0.10 | 0.07 | 0.449 | 1.475 (0.539–4.040) |
| rs216489 | 11 | 16823736 | G | 0.41 | 0.38 | 0.668 | 1.131 (0.645–1.982) |
| rs1027617 | 11 | 16842787 | A | 0.38 | 0.45 | 0.321 | 0.754 (0.431–1.317) |
| rs366590 | 11 | 16872440 | A | 0.23 | 0.20 | 0.607 | 1.194 (0.608–2.343) |
| rs11024060 | 11 | 16881961 | T | 0.29 | 0.36 | 0.297 | 0.732 (0.407–1.316) |
| rs6486330 | 11 | 16990290 | T | 0.20 | 0.19 | 0.859 | 1.065 (0.530–2.142) |
| rs11024097 | 11 | 16999029 | C | 0.36 | 0.45 | 0.200 | 0.693 (0.395–1.215) |
| rs11024102 | 11 | 17008605 | C | 0.44 | 0.41 | 0.671 | 1.128 (0.647–1.965) |
Chi-square tests and logistic regression were used. CHR: chromosome; BP: base pair position; MA: minor allele; MAF: minor allele frequency; MAF Case: minor allele frequencies in cases; MAF Control: minor allele frequencies in controls; OR: odds ratio; CI: confidence interval.