Table 4.

Rankings of individual SNPs in the WHI Clinical Trial and Observational Study SHARe from the following analyses: (1) Univariate Cox PH model; (2) RSF; (3) modified RSF. Each analysis simultaneously adjusted for all potential confounding variables as well as the top two principal components to account for population stratification. SNPs are ordered from most (rank= 1) to least important (rank > 1000) with regard to their association with time to incident Type 2 diabetes.

SNP	Gene	Left Gene	Right Gene	Cox PH	RSF	modified RSF
rs10777370		DCN	BTG1	102	> 1000	1
rs639724		LOC100130372	LOC284749	> 1000	31	2
rs16983007				715	> 1000	3
rs7187364	WWOX	LOC645947	LOC729251	615	> 1000	4
rs2805429	RYR2	MT1P2	LOC100130331	4	> 1000	5
rs10733596	SNX30	C9orf80	SLC46A2	246	> 1000	6
rs16997235				26	4	7
rs17087990		ATXN8OS	DACH1	151	> 1000	8
rs17627111	ESRRG	USH2A	GPATCH2	> 1000	> 1000	9
rs10126793				15	20	10
rs16917265		C9orf80	SNX30	1	1	47
rs16991792	LOC731957	SYN3	LARGE	7	> 1000	248
rs1277957		EFNB1	PJA1	> 1000	2	392
rs10859620	HERC3	LOC100129137	NAP1L5	30	9	> 1000
rs1457586	ZNF385D	VENTXP7	LOC728516	2	156	> 1000
rs17300926				6	528	> 1000
rs17555633	SLIT3	LOC728095	CCDC99	> 1000	3	> 1000
rs7707956		EDIL3	LOC391807	> 1000	5	> 1000
rs2365943	PTPRG	FHIT	LOC100128936	> 1000	6	> 1000
rs9345756		ADH5P4	NUFIP1P	> 1000	7	> 1000
rs7762347		LOC100131805	LOC100129616	> 1000	8	> 1000
rs6553479		LOC402192	LOC100131470	> 1000	10	> 1000
rs2805434	RYR2	MT1P2	LOC100130331	3	> 1000	> 1000
rs137299	LOC731957	SYN3	LARGE	5	> 1000	> 1000
rs286588		MRPS35P1	MRPS36P1	8	> 1000	> 1000
rs11769851		tcag7.955	LOC442727	9	> 1000	> 1000
rs1317548	CDC123	NUDT5	CAMK1D	10	> 1000	> 1000