Table 1.
Sequencing summary.
| INSTRUMENT | |
| Manufacturer | Illumina |
| Version | HiSeq 2500 |
| Slot used | A |
| Basecalling pipeline | -HiSeq Control Software 2.2.38 -RTA 1.18.61.0 -CASAVA-1.8.2 |
| RUN | |
| Mode | HiSeq high output (HO) version 4 |
| Number of cycles | 2 × 150 + 7 |
| Number of lanes | 1 |
| Flow cell ID | HL7FHCCXX |
| Flow cell version | HiSeq Flow Cell v4 |
| Kit version | HiSeq SBS Kit v4 |
| Indexing | Single-Indexing |
| Data output C | 5.18 Gb |
| Data output (nvAG83 infected macrophage) | 4.36 Gb |
| Data output (vAG83 infected macrophage) | 4.36 Gb |
| SEQUENCING SPECIFICATION | |
| Service | Full lane |
| Error rate | 1.5% |
| Q30 | 80% |