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. 2019 Feb 5;10:38. doi: 10.3389/fgene.2019.00038

TABLE 1.

STRs selected for MJD haplotype analysis, respective distances from the (CAG)n and primers used for genotyping. F - Forward primer; R - Reverse primer.

Primers Distance from the (CAG)n Primer sequence (5′–3′)
TAT223_F∗1 223 kb CCACACTTCCTTTGGACCAT
TAT223_R GGTAGGCACCAGCTACTTGGG
GT199_F 199 kb TTACTGGGTAGGATATACATTCC
GT199_R∗1 CAGCCTTCCCCCGAGTCC
ATA194_F 194 kb CCTTATCTAACCTCCTACATCTCAGC
ATA194_R∗2 GCAGGGCAGGCAATGAAACACG
MJD52_F CCAGTGACTACTTTGATTCG
CAG_R∗3 GTGTGAAGGTAGCGAACATGATG
AC21_F∗1 21 kb CTTCAGCTCAAATGCTATCAAAC
AC21_R CAAGGATGGCTAGTGCAGAAAT
AAAC123_F 123 kb CAGATGGGATAGGCCACAGT
AAAC123_R∗1 AGTGGAGGCTTCAACCTGTT
GT190_F∗4 190 kb GAGGGGACCTGGCCTACTAC
GT190_R ACCTACAGTAACACACTTTGCAC
AC190_F∗2 191 kb CTGGGAGGAGGAGGGTACAA
AC190_R AACCCTGACTCAACTCTCGG

Fluorescent labels ∗1FAM (6-carboxufluorescein); ∗2NED; ∗3PET; and ∗4VIC